Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.36169	Sfxn3	sideroflexin 3	19		94280
Gene Ontology	cation transport | cation transporter activity | integral to membrane | iron ion transport | membrane | mitochondrion | transport
Human Homolog	BA108L7.2[similar to rat tricarboxylate carrier-like protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC ACCATTACTG (7) 6.5 0.0065 P8 Cb GC TGCCACCAAA (4) 6.5 0.0065 P8 Cb GC TCAGCCCAGG (2) 4.9 0.0049 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma ACCATTACTG (7) 6.9 0.0069 Cb medulloblastoma TGCCACCAAA (4) 6.9 0.0069 Cb medulloblastoma CCCCCCACCC (9) 4.6 0.0046 Cb medulloblastoma GTGTCAATAA (3) 2.3 0.0023 Cb medulloblastoma TCAGCCCAGG (2) 2.3 0.0023 Cb medulloblastoma TGTAACAAGA (3) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GTGTCAATAA (3) 6.8 0.0068 P8 GC+1d culture TGCCACCAAA (4) 6.8 0.0068 P8 GC+1d culture ACCATTACTG (7) 3.4 0.0034 P8 GC+1d culture CCTTTTAATC (5) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GTGTCAATAA (3) 4.7 0.0047 P8 GC+SHH+1d culture TGCCACCAAA (4) 3.5 0.0035 P8 GC+SHH+1d culture AACACTCTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTTTTAATC (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TCAGCCCAGG (2) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GTGTCAATAA (3) 4.9 0.0049 E15 cortex TGTAACAAGA (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TGCCACCAAA (4) 9.1 0.0091 P1 cortex CCTTTTAATC (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTGTCAATAA (3) 5.4 0.0054 Hypothalamus TGCCACCAAA (4) 3.6 0.0036 Hypothalamus TCAGCCCAGG (2) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TGTTGGAAGG 7.5 0.0075 E12.5 retina TCAGCCCAGG (2) 5.6 0.0056 E12.5 retina TGCCACCAAA (4) 5.6 0.0056 E12.5 retina AACACTCTGG (2) 1.9 0.0019 E12.5 retina GTGTCAATAA (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTGTCAATAA (3) 5.5 0.0055 E14.5 retina TGCCACCAAA (4) 5.5 0.0055 E14.5 retina CCTTTTAATC (5) 1.8 0.0018 E14.5 retina TGACCAGGCT 1.8 0.0018 E14.5 retina TGTAACAAGA (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTGTCAATAA (3) 5.4 0.0054 E16.5 retina CCCCCCACCC (9) 1.8 0.0018 E16.5 retina TCAGCCCAGG (2) 1.8 0.0018 E16.5 retina TGCCACCAAA (4) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGCCACCAAA (4) 16.4 0.0164 E18.5 retina GTGTCAATAA (3) 7.3 0.0073 E18.5 retina ACCATTACTG (7) 1.8 0.0018 E18.5 retina TCAGCCCAGG (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TGCCACCAAA (4) 5.9 0.0059 P0.5 retina CTCCCACTTT 3.9 0.0039 P0.5 retina CCCCCCACCC (9) 2 0.002 P0.5 retina CCTTTTAATC (5) 2 0.002 P0.5 retina GTGTCAATAA (3) 2 0.002 P0.5 retina TCAGCCCAGG (2) 2 0.002 P0.5 retina TGTAACAAGA (3) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGCCACCAAA (4) 7 0.007 P2.5 retina GTGTCAATAA (3) 5.3 0.0053 P2.5 retina CCTTTTAATC (5) 3.5 0.0035 P2.5 retina CCCCCCACCC (9) 1.8 0.0018 P2.5 retina CTCCCACTTT 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GTGTCAATAA (3) 5.9 0.0059 P4.5 retina CCTTTTAATC (5) 4 0.004 P4.5 retina AACACTCTGG (2) 2 0.002 P4.5 retina ACCATTACTG (7) 2 0.002 P4.5 retina TGCCACCAAA (4) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GTGTCAATAA (3) 5 0.005 P6.5 retina CTCCCACTTT 3.3 0.0033 P6.5 retina TGCCACCAAA (4) 3.3 0.0033 P6.5 retina CCTTTTAATC (5) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AACACTCTGG (2) 1.9 0.0019 P10.5 crx- retina CCTTTTAATC (5) 1.9 0.0019 P10.5 crx- retina TGCCACCAAA (4) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TGCCACCAAA (4) 11.5 0.0115 P10.5 crx+ retina ACCATTACTG (7) 3.8 0.0038 P10.5 crx+ retina CCTTTTAATC (5) 3.8 0.0038 P10.5 crx+ retina CTCCCACTTT 3.8 0.0038 P10.5 crx+ retina GTGTCAATAA (3) 3.8 0.0038 P10.5 crx+ retina TGACCAGGCT 3.8 0.0038 P10.5 crx+ retina TGTAACAAGA (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TGCCACCAAA (4) 16.7 0.0167 Adult retinal GTGTCAATAA (3) 5.6 0.0056 Adult retinal CCTTTTAATC (5) 3.7 0.0037 Adult retinal ACCATTACTG (7) 1.9 0.0019 Adult retinal CTCCCACTTT 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGTCAATAA (3) 9.6 0.0096 ONL ACCATTACTG (7) 3.8 0.0038 ONL CTCCCACTTT 1.9 0.0019 ONL TGCCACCAAA (4) 1.9 0.0019