| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATAAACTTTT (2) TTTCCAAGGC
| 3.2 | 0.0032 |
| Cb medulloblastoma | AGTTTTTCAC GCATTTAACA TTTCCAAGGC
| 9.2 | 0.0092 |
| P8 GC+1d culture | AGTTTTTCAC
| 2.3 | 0.0023 |
| P8 GC+SHH+1d culture | AGTTTTTCAC ATAAACTTTT (2) TCAAACAGCT TTGATATTGT
| 7.1 | 0.0071 |
| P1 cortex | AGTTTTTCAC CATATATTCA GAGAAACTGA
| 50 | 0.05 |
| Hypothalamus | AGTTTTTCAC GAGAAACTGA TTGATATTGT TTTCCAAGGC
| 10.8 | 0.0108 |
| E12.5 retina | ATAAACTTTT (2) GCATTTAACA
| 7.5 | 0.0075 |
| E14.5 retina | ATAAACTTTT (2)
| 1.8 | 0.0018 |
| E16.5 retina | ATAAACTTTT (2) CATATATTCA TTGATATTGT
| 5.4 | 0.0054 |
| E18.5 retina | ATAAACTTTT (2) TCAAACAGCT TTGATATTGT
| 9.1 | 0.0091 |
| P2.5 retina | AGTTTTTCAC ATAAACTTTT (2) TTGATATTGT
| 8.9 | 0.0089 |
| P4.5 retina | ATAAACTTTT (2) GCATTTAACA TTGATATTGT
| 11.9 | 0.0119 |
| P6.5 retina | ATAAACTTTT (2) CATATATTCA
| 5 | 0.005 |
| P10.5 crx- retina | AGTTTTTCAC ATAAACTTTT (2)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | AGTTTTTCAC ATAAACTTTT (2)
| 5.7 | 0.0057 |
| Adult retinal | AGTTTTTCAC CATATATTCA GAGAAACTGA TTGATATTGT
| 13.1 | 0.0131 |
| ONL | AGTTTTTCAC ATAAACTTTT (2) TCAAACAGCT
| 5.7 | 0.0057 |