Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3667	Vtn	vitronectin	11	11 B3 (11 45.09 cM)	22370
Gene Ontology	cell adhesion | extracellular space | heparin binding | protein binding
Human Homolog	VTN[vitronectin (serum spreading factor, somatomedin B, complement S-protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTGCCAGG (2) 1.6 0.0016 P8 Cb GC TTGATGCAGG (4) 1.6 0.0016 Cb medulloblastoma CTGCCTTCAC (2) 2.3 0.0023 Cb medulloblastoma GAGCAGTGCA (3) 2.3 0.0023 Cb medulloblastoma TTGATGCAGG (4) 2.3 0.0023 P8 GC+1d culture GTGGGCCCAG (5) 3.4 0.0034 P8 GC+1d culture GTGTGCCAGG (2) 2.3 0.0023 P8 GC+1d culture CTGCCTTCAC (2) 1.1 0.0011 P8 GC+1d culture GGGTGCCAGG (3) 1.1 0.0011 P8 GC+SHH+1d culture GTGTGCCAGG (2) 3.5 0.0035 P8 GC+SHH+1d culture GAGCAGTGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGGGGG (7) 1.2 0.0012 3T3 fibroblasts TTGATGCAGG (4) 3.5 0.0035 E15 cortex GTCAGCAAAA (2) 4.9 0.0049 Hypothalamus GGGTGCCAGG (3) 3.6 0.0036 Hypothalamus GAGCAGTGCA (3) 1.8 0.0018 Hypothalamus GAGGAGGGGG (7) 1.8 0.0018 Hypothalamus GTGTGCCAGG (2) 1.8 0.0018 E12.5 retina CTGCCTTCAC (2) 1.9 0.0019 E12.5 retina GTCAGCAAAA (2) 1.9 0.0019 E12.5 retina GTGTGCCAGG (2) 1.9 0.0019 E14.5 retina GAGCAGTGCA (3) 1.8 0.0018 E14.5 retina GAGGAGGGGG (7) 1.8 0.0018 E16.5 retina GAGCAGTGCA (3) 3.6 0.0036 E16.5 retina TTGATGCAGG (4) 1.8 0.0018 P0.5 retina GTGTGCCAGG (2) 3.9 0.0039 P0.5 retina CTGCCTTCAC (2) 2 0.002 P0.5 retina GGGTGCCAGG (3) 2 0.002 P4.5 retina GTGGGCCCAG (5) 2 0.002 P6.5 retina GTGGGCCCAG (5) 1.7 0.0017 P10.5 crx- retina GTCAGCAAAA (2) 3.7 0.0037 P10.5 crx+ retina GGGTGCCAGG (3) 1.9 0.0019 Adult retinal GTGTGCCAGG (2) 79.6 0.0796 Adult retinal GTCAGCAAAA (2) 3.7 0.0037 Adult retinal CTGCCTTCAC (2) 1.9 0.0019 ONL GTGTGCCAGG (2) 32.6 0.0326 ONL GAGGAGGGGG (7) 7.7 0.0077