Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.36907
2410043I01Rik
RIKEN cDNA 2410043I01 gene
16
53966
Mm.36907
AA409624
expressed sequence AA409624
X
102847
Mm.36907
2510002D24Rik
RIKEN cDNA 2510002D24 gene
16
72307
Human Homolog
LOC128977[hypothetical protein LOC128977]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGACACTTTA
(
8
)
1.6
0.0016
P8 Cb GC
TTTGATTCCA
(
4
)
1.6
0.0016
Cb medulloblastoma
TGACACTTTA
(
8
)
6.9
0.0069
Cb medulloblastoma
GCCAAGGAGG
(
6
)
2.3
0.0023
P8 GC+1d culture
CTCAGTGGGT
(
4
)
1.1
0.0011
P8 GC+1d culture
TGACACTTTA
(
8
)
1.1
0.0011
P8 GC+SHH+1d culture
TGACACTTTA
(
8
)
7
0.007
P8 GC+SHH+1d culture
GCCAAGGAGG
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGATTCCA
(
4
)
1.2
0.0012
E15 cortex
TGAAGCAGCT (
6
)
9.9
0.0099
E15 cortex
TTTGATTCCA
(
4
)
4.9
0.0049
Hypothalamus
GCCAAGGAGG
(
6
)
1.8
0.0018
Hypothalamus
TGAAGCAGCT (
6
)
1.8
0.0018
Hypothalamus
TGACACTTTA
(
8
)
1.8
0.0018
E12.5 retina
TGACACTTTA
(
8
)
3.8
0.0038
E14.5 retina
CTCAGTGGGT
(
4
)
5.5
0.0055
E14.5 retina
TGACACTTTA
(
8
)
3.6
0.0036
E18.5 retina
TGACACTTTA
(
8
)
3.6
0.0036
P0.5 retina
CTCAGTGGGT
(
4
)
3.9
0.0039
P0.5 retina
TGAAGCAGCT (
6
)
3.9
0.0039
P0.5 retina
TGACACTTTA
(
8
)
2
0.002
P2.5 retina
TGACACTTTA
(
8
)
5.3
0.0053
P2.5 retina
CTCAGTGGGT
(
4
)
1.8
0.0018
P4.5 retina
TGACACTTTA
(
8
)
5.9
0.0059
P4.5 retina
TTTGATTCCA
(
4
)
2
0.002
P6.5 retina
TGACACTTTA
(
8
)
10
0.01
P6.5 retina
CTCAGTGGGT
(
4
)
1.7
0.0017
P6.5 retina
TGAAGCAGCT (
6
)
1.7
0.0017
P10.5 crx- retina
CTCAGTGGGT
(
4
)
1.9
0.0019
P10.5 crx- retina
GCCAAGGAGG
(
6
)
1.9
0.0019
P10.5 crx+ retina
TGAAGCAGCT (
6
)
1.9
0.0019
P10.5 crx+ retina
TGACACTTTA
(
8
)
1.9
0.0019
Adult retinal
CTCAGTGGGT
(
4
)
5.6
0.0056
Adult retinal
GCCAAGGAGG
(
6
)
1.9
0.0019
Adult retinal
TGACACTTTA
(
8
)
1.9
0.0019
ONL
TGACACTTTA
(
8
)
3.8
0.0038
ONL
CTCAGTGGGT
(
4
)
1.9
0.0019
