Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.37203
Csh2
chorionic somatomammotropin hormone 2
13
13 14.0 cM
18776
Gene Ontology
extracellular
|
extracellular space
|
hormone activity
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 90 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
GTCAGATTTT
(
8
)
32.6
0.0326
P8 Cb GC
AATTTCCCCT (
4
)
1.6
0.0016
P8 Cb GC
CTTAAAAAAA (
12
)
1.6
0.0016
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
AATTTCCCCT (
4
)
13.9
0.0139
Cb medulloblastoma
CTTAAAAAAA (
12
)
9.2
0.0092
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
GTCAGATTTT
(
8
)
16
0.016
P8 GC+1d culture
CTTAAAAAAA (
12
)
3.4
0.0034
P8 GC+1d culture
AATTTCCCCT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
GTCAGATTTT
(
8
)
22.2
0.0222
P8 GC+SHH+1d culture
CTTAAAAAAA (
12
)
5.9
0.0059
3T3 fibroblasts
AATTTCCCCT (
4
)
3.5
0.0035
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
GTCAGATTTT
(
8
)
24.7
0.0247
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
AATTTCCCCT (
4
)
27.3
0.0273
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
P1 cortex
GTCAGATTTT
(
8
)
13.6
0.0136
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
CTTAAAAAAA (
12
)
10.9
0.0109
Hypothalamus
AATTCCTTCT (
4
)
1.8
0.0018
Hypothalamus
AATTTCCCCT (
4
)
1.8
0.0018
Hypothalamus
GTCAGATTTT
(
8
)
1.8
0.0018
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
AATTTCCCCT (
4
)
7.5
0.0075
E12.5 retina
AATTCCTTCT (
4
)
1.9
0.0019
E12.5 retina
CTTAAAAAAA (
12
)
1.9
0.0019
E12.5 retina
GTCAGATTTT
(
8
)
1.9
0.0019
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
CTTAAAAAAA (
12
)
10.9
0.0109
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
GTCAGATTTT
(
8
)
5.5
0.0055
E14.5 retina
AATTTCCCCT (
4
)
1.8
0.0018
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
AATTTCCCCT (
4
)
9.1
0.0091
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
GTCAGATTTT
(
8
)
5.4
0.0054
E16.5 retina
CTTAAAAAAA (
12
)
1.8
0.0018
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
CTTAAAAAAA (
12
)
7.3
0.0073
E18.5 retina
GTCAGATTTT
(
8
)
7.3
0.0073
E18.5 retina
AATTTCCCCT (
4
)
1.8
0.0018
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
AATTTCCCCT (
4
)
3.9
0.0039
P0.5 retina
CTTAAAAAAA (
12
)
2
0.002
P0.5 retina
GTCAGATTTT
(
8
)
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
CTTAAAAAAA (
12
)
14.1
0.0141
P2.5 retina
AATTTCCCCT (
4
)
12.3
0.0123
P2.5 retina
GTCAGATTTT
(
8
)
8.8
0.0088
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
AATTTCCCCT (
4
)
7.9
0.0079
P4.5 retina
GTCAGATTTT
(
8
)
4
0.004
P4.5 retina
CTTAAAAAAA (
12
)
2
0.002
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
AATTTCCCCT (
4
)
6.7
0.0067
P6.5 retina
CTTAAAAAAA (
12
)
3.3
0.0033
P6.5 retina
GTCAGATTTT
(
8
)
3.3
0.0033
P6.5 retina
AATTCCTTCT (
4
)
1.7
0.0017
P10.5 crx- retina
AATTTCCCCT (
4
)
65
0.065
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
CTTAAAAAAA (
12
)
1.9
0.0019
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
AATTTCCCCT (
4
)
13.5
0.0135
P10.5 crx+ retina
CTTAAAAAAA (
12
)
5.8
0.0058
P10.5 crx+ retina
GTCAGATTTT
(
8
)
3.8
0.0038
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
CTTAAAAAAA (
12
)
1.9
0.0019
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
AATTTCCCCT (
4
)
3.8
0.0038
ONL
GTCAGATTTT
(
8
)
3.8
0.0038
