Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.37249	Cyfip1	cytoplasmic FMR1 interacting protein 1	7		20430
Gene Ontology	lamellipodium | lamellipodium biogenesis | profilin binding
Human Homolog	CYFIP1[cytoplasmic FMR1 interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGCTGTGT (4) 22.8 0.0228 P8 Cb GC GGATTTGGCC (6) 19.6 0.0196 P8 Cb GC CCGAATATTC (2) 3.3 0.0033 P8 Cb GC AAGACAAAGT (5) 1.6 0.0016 P8 Cb GC GCTGCTGAAA (4) 1.6 0.0016 P8 Cb GC TGAGGAAATG (7) 1.6 0.0016 Cb medulloblastoma AAGGGCAGGG (2) 4.6 0.0046 Cb medulloblastoma AGCCCTTTTA (3) 4.6 0.0046 P8 GC+1d culture TTTGCTGTGT (4) 10.3 0.0103 P8 GC+1d culture GGATTTGGCC (6) 5.7 0.0057 P8 GC+1d culture TGAGGAAATG (7) 1.1 0.0011 P8 GC+SHH+1d culture TTTGCTGTGT (4) 9.4 0.0094 P8 GC+SHH+1d culture GGATTTGGCC (6) 3.5 0.0035 P8 GC+SHH+1d culture TGAGGAAATG (7) 3.5 0.0035 P8 GC+SHH+1d culture CCGAATATTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCTGAAA (4) 2.3 0.0023 3T3 fibroblasts CCGAATATTC (2) 3.5 0.0035 3T3 fibroblasts GGATTTGGCC (6) 3.5 0.0035 3T3 fibroblasts GGGATTTGGC (2) 3.5 0.0035 3T3 fibroblasts TTTGCTGTGT (4) 3.5 0.0035 E15 cortex AAGACAAAGT (5) 4.9 0.0049 E15 cortex CCGAATATTC (2) 4.9 0.0049 E15 cortex GATCCAAGGC (2) 4.9 0.0049 E15 cortex TGAGGAAATG (7) 4.9 0.0049 P1 cortex TTTGCTGTGT (4) 4.5 0.0045 Hypothalamus GCTGCTGAAA (4) 5.4 0.0054 Hypothalamus TTTGCTGTGT (4) 5.4 0.0054 Hypothalamus GTAATTCTAA (3) 3.6 0.0036 Hypothalamus AAGACAAAGT (5) 1.8 0.0018 Hypothalamus CCGAATATTC (2) 1.8 0.0018 Hypothalamus GGATTTGGGC (2) 1.8 0.0018 Hypothalamus TGAGGAAATG (7) 1.8 0.0018 E12.5 retina GGATTTGGCC (6) 3.8 0.0038 E12.5 retina AGCCCTTTTA (3) 1.9 0.0019 E12.5 retina GATCCAAGGC (2) 1.9 0.0019 E12.5 retina GCTGCTGAAA (4) 1.9 0.0019 E12.5 retina GGATTTTGGC (8) 1.9 0.0019 E12.5 retina GGGATTTGGC (2) 1.9 0.0019 E12.5 retina TTTGCTGTGT (4) 1.9 0.0019 E14.5 retina GGATTTGGCC (6) 16.4 0.0164 E14.5 retina TTTGCTGTGT (4) 3.6 0.0036 E14.5 retina GGGATTTGGC (2) 1.8 0.0018 E14.5 retina TGAGGAAATG (7) 1.8 0.0018 E16.5 retina TTTGCTGTGT (4) 3.6 0.0036 E16.5 retina CCGAATATTC (2) 1.8 0.0018 E16.5 retina GGATTTGGCC (6) 1.8 0.0018 E16.5 retina TGAGGAAATG (7) 1.8 0.0018 E16.5 retina TTCTGGTCTC (5) 1.8 0.0018 E18.5 retina GGATTTGGCC (6) 16.4 0.0164 E18.5 retina TTTGCTGTGT (4) 5.5 0.0055 E18.5 retina GTAATTCTAA (3) 3.6 0.0036 P0.5 retina TTTGCTGTGT (4) 9.8 0.0098 P0.5 retina CCGAATATTC (2) 5.9 0.0059 P0.5 retina GGATTTTGGC (8) 3.9 0.0039 P0.5 retina TTCTGGTCTC (5) 3.9 0.0039 P0.5 retina AGCCCTTTTA (3) 2 0.002 P0.5 retina GGATTTGGCC (6) 2 0.002 P0.5 retina GGATTTGGGC (2) 2 0.002 P2.5 retina TTTGCTGTGT (4) 10.6 0.0106 P2.5 retina GGATTTGGGC (2) 3.5 0.0035 P2.5 retina AAGGGCAGGG (2) 1.8 0.0018 P2.5 retina CCGAATATTC (2) 1.8 0.0018 P2.5 retina GATCCAAGGC (2) 1.8 0.0018 P2.5 retina GCTGCTGAAA (4) 1.8 0.0018 P2.5 retina GGATTTTGGC (8) 1.8 0.0018 P2.5 retina GTAATTCTAA (3) 1.8 0.0018 P2.5 retina TGAGGAAATG (7) 1.8 0.0018 P4.5 retina TTTGCTGTGT (4) 9.9 0.0099 P4.5 retina AGCCCTTTTA (3) 2 0.002 P4.5 retina CCGAATATTC (2) 2 0.002 P4.5 retina GGATTTGGGC (2) 2 0.002 P4.5 retina GGATTTTGGC (8) 2 0.002 P4.5 retina GGGATTTGGC (2) 2 0.002 P6.5 retina TTTGCTGTGT (4) 5 0.005 P6.5 retina GGATTTGGCC (6) 3.3 0.0033 P6.5 retina AGCCCTTTTA (3) 1.7 0.0017 P6.5 retina GATCCAAGGC (2) 1.7 0.0017 P6.5 retina GGATTTTGGC (8) 1.7 0.0017 P10.5 crx- retina TTTGCTGTGT (4) 20.4 0.0204 P10.5 crx- retina CCGAATATTC (2) 5.6 0.0056 P10.5 crx- retina GGATTTGGCC (6) 3.7 0.0037 P10.5 crx+ retina TTTGCTGTGT (4) 5.8 0.0058 P10.5 crx+ retina AAGGGCAGGG (2) 1.9 0.0019 P10.5 crx+ retina GCTGCTGAAA (4) 1.9 0.0019 P10.5 crx+ retina GGGATTTGGC (2) 1.9 0.0019 Adult retinal TTTGCTGTGT (4) 3.7 0.0037 Adult retinal AAGGGCAGGG (2) 1.9 0.0019 Adult retinal GGATTTTGGC (8) 1.9 0.0019 ONL GGATTTGGCC (6) 28.7 0.0287 ONL GGATTTGGGC (2) 3.8 0.0038 ONL GGATTTTGGC (8) 1.9 0.0019 ONL TGAGGAAATG (7) 1.9 0.0019