Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.37516	Dnajb11	DnaJ (Hsp40) homolog, subfamily B, member 11	16		67838
Gene Ontology	chaperone activity | co-chaperonin activity | cytoplasm | cytoplasm | endoplasmic reticulum | mRNA editing | mRNA editing | nucleus | nucleus | protein binding | protein binding | protein folding
Human Homolog	DNAJB11[DnaJ (Hsp40) homolog, subfamily B, member 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGAAGTCTG (4) 31 0.031 P8 Cb GC AATTAAAGTT (2) 3.3 0.0033 P8 Cb GC CTGTGTGGCC (5) 1.6 0.0016 Cb medulloblastoma CTGTGTGGCC (5) 4.6 0.0046 Cb medulloblastoma GGGAAGTCTG (4) 4.6 0.0046 P8 GC+1d culture GGGAAGTCTG (4) 19.4 0.0194 P8 GC+1d culture CTGTGTGGCC (5) 5.7 0.0057 P8 GC+1d culture TGGATGGGGA 4.6 0.0046 P8 GC+1d culture AATTAAAGTT (2) 2.3 0.0023 P8 GC+1d culture GTTGGGGGAG (4) 1.1 0.0011 P8 GC+SHH+1d culture GGGAAGTCTG (4) 12.9 0.0129 P8 GC+SHH+1d culture AATTAAAGTT (2) 5.9 0.0059 P8 GC+SHH+1d culture CTGTGTGGCC (5) 3.5 0.0035 P8 GC+SHH+1d culture TGGATGGGGA 3.5 0.0035 3T3 fibroblasts GGGAAGTCTG (4) 56.1 0.0561 3T3 fibroblasts CTGTGTGGCC (5) 3.5 0.0035 3T3 fibroblasts TGGATGGGGA 3.5 0.0035 E15 cortex GGGAAGTCTG (4) 4.9 0.0049 P1 cortex AATTAAAGTT (2) 4.5 0.0045 P1 cortex GGGAAGTCTG (4) 4.5 0.0045 Hypothalamus GGGAAGTCTG (4) 1.8 0.0018 Hypothalamus TGGATGGGGA 1.8 0.0018 E12.5 retina GTTGGGGGAG (4) 1.9 0.0019 E14.5 retina AATTAAAGTT (2) 3.6 0.0036 E14.5 retina TGGATGGGGA 3.6 0.0036 E14.5 retina GGGAAGTCTG (4) 1.8 0.0018 E16.5 retina AATTAAAGTT (2) 3.6 0.0036 E16.5 retina CTGTGTGGCC (5) 1.8 0.0018 E18.5 retina AATTAAAGTT (2) 3.6 0.0036 E18.5 retina GGGAAGTCTG (4) 3.6 0.0036 P0.5 retina TGGATGGGGA 5.9 0.0059 P0.5 retina CTGTGTGGCC (5) 2 0.002 P0.5 retina GGGAAGTCTG (4) 2 0.002 P0.5 retina GTTGGGGGAG (4) 2 0.002 P2.5 retina CTGTGTGGCC (5) 12.3 0.0123 P2.5 retina AATTAAAGTT (2) 3.5 0.0035 P2.5 retina GGGAAGTCTG (4) 3.5 0.0035 P2.5 retina TGGATGGGGA 1.8 0.0018 P4.5 retina AATTAAAGTT (2) 2 0.002 P4.5 retina CTGTGTGGCC (5) 2 0.002 P6.5 retina GGGAAGTCTG (4) 6.7 0.0067 P6.5 retina AATTAAAGTT (2) 3.3 0.0033 P6.5 retina CTGTGTGGCC (5) 1.7 0.0017 P6.5 retina GTTGGGGGAG (4) 1.7 0.0017 P6.5 retina TGGATGGGGA 1.7 0.0017 P10.5 crx- retina GGGAAGTCTG (4) 57.6 0.0576 P10.5 crx- retina AATTAAAGTT (2) 9.3 0.0093 P10.5 crx- retina CTGTGTGGCC (5) 1.9 0.0019 P10.5 crx+ retina GGGAAGTCTG (4) 30.8 0.0308 P10.5 crx+ retina CTGTGTGGCC (5) 1.9 0.0019 P10.5 crx+ retina GTTGGGGGAG (4) 1.9 0.0019 Adult retinal GGGAAGTCTG (4) 5.6 0.0056 ONL AATTAAAGTT (2) 7.7 0.0077 ONL GGGAAGTCTG (4) 1.9 0.0019 ONL TGGATGGGGA 1.9 0.0019