Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.37533
Homer1
homer homolog 1 (Drosophila)
13
26556
Mm.37533
C330006P03Rik
RIKEN cDNA C330006P03 gene
13
320588
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATCTTCCAC
(
3
)
1.6
0.0016
Cb medulloblastoma
TATCTTCCAC
(
3
)
2.3
0.0023
P8 GC+1d culture
TATCTTCCAC
(
3
)
3.4
0.0034
P8 GC+SHH+1d culture
CTCAGAGATG
(
2
)
TATCTTCCAC
(
3
)
3.5
0.0035
3T3 fibroblasts
TGGACTTGCA
(
2
)
3.5
0.0035
P1 cortex
CTCAGAGATG
(
2
)
TATCTTCCAC
(
3
)
TGGACTTGCA
(
2
)
13.5
0.0135
Hypothalamus
CTCAGAGATG
(
2
)
TGGACTTGCA
(
2
)
3.6
0.0036
E12.5 retina
GAGCCAAATT
(
3
)
1.9
0.0019
E16.5 retina
CTCAGAGATG
(
2
)
TATCTTCCAC
(
3
)
5.4
0.0054
E18.5 retina
TATCTTCCAC
(
3
)
1.8
0.0018
P0.5 retina
TATCTTCCAC
(
3
)
TGGACTTGCA
(
2
)
4
0.004
P2.5 retina
TATCTTCCAC
(
3
)
TGGACTTGCA
(
2
)
3.6
0.0036
P4.5 retina
TATCTTCCAC
(
3
)
2
0.002
P6.5 retina
GAGCCAAATT
(
3
)
1.7
0.0017
P10.5 crx- retina
TATCTTCCAC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGGACTTGCA
(
2
)
3.8
0.0038
Adult retinal
CTCAGAGATG
(
2
)
1.9
0.0019
ONL
GAGCCAAATT
(
3
)
1.9
0.0019
