Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3783
2300002D11Rik
RIKEN cDNA 2300002D11 gene
4
69539
Mm.3783
U46068
cDNA sequence U46068
2
228801
Gene Ontology
lipid binding
Human Homolog
C20orf114[chromosome 20 open reading frame 114]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
CAGAAAGGCA
(
3
)
16.2
0.0162
P8 GC+1d culture
CAGAAAGGCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGAAAGGCA
(
3
)
TAGTCTGTGA
(
4
)
4.7
0.0047
E15 cortex
TGGTCTGTGA
(
4
)
4.9
0.0049
Hypothalamus
CAGAAAGGCA
(
3
)
7.2
0.0072
E12.5 retina
GGGCTCCACA
(
2
)
1.9
0.0019
E14.5 retina
TAGTCTGTGA
(
4
)
TGGTCTGTGA
(
4
)
3.6
0.0036
E18.5 retina
TGGTCTGTGA
(
4
)
1.8
0.0018
P2.5 retina
CAGAAAGGCA
(
3
)
TAGTCTGTGA
(
4
)
5.3
0.0053
P4.5 retina
CAGAAAGGCA
(
3
)
2
0.002
P6.5 retina
CAGAAAGGCA
(
3
)
GGGCTCCACA
(
2
)
18.4
0.0184
P10.5 crx- retina
CAGAAAGGCA
(
3
)
74.3
0.0743
P10.5 crx+ retina
CAGAAAGGCA
(
3
)
28.8
0.0288
Adult retinal
CAGAAAGGCA
(
3
)
40.7
0.0407
ONL
CAGAAAGGCA
(
3
)
GGGCTCCACA
(
2
)
9.6
0.0096
