Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38009	A930039J07Rik	RIKEN cDNA A930039J07 gene	2		77828
Mm.38009	AI854601	expressed sequence AI854601	2		99123
Mm.38009	C230058B11Rik	RIKEN cDNA C230058B11 gene	2		320180
Mm.38009	Plcb4	phospholipase C, beta 4	2	2 77.0 cM	18798
Gene Ontology	intracellular signaling cascade | lipid metabolism | phosphoinositide phospholipase C activity | phospholipase C activity | signal transduction
Human Homolog	PLCB4[phospholipase C, beta 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTAAATGT (10) 4.9 0.0049 P8 Cb GC CCTCAAAAAA (12) 3.3 0.0033 P8 Cb GC AAGGCTAAAA (5) 1.6 0.0016 P8 Cb GC CAGATTAAAA (8) 1.6 0.0016 Cb medulloblastoma TATTAAATGT (10) 25.4 0.0254 Cb medulloblastoma AAGGCTAAAA (5) 18.5 0.0185 Cb medulloblastoma AGAAAATCCT (5) 4.6 0.0046 Cb medulloblastoma CAAAGGAAGG (7) 2.3 0.0023 P8 GC+1d culture TATTAAATGT (10) 8 0.008 P8 GC+1d culture GCCCCTAAAA (6) 4.6 0.0046 P8 GC+1d culture TTTCTTCTTT (11) 3.4 0.0034 P8 GC+1d culture CAGATTAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture TATTAAATGT (10) 4.7 0.0047 P8 GC+SHH+1d culture CCTCAAAAAA (12) 2.3 0.0023 P8 GC+SHH+1d culture TTTCTTCTTT (11) 2.3 0.0023 P8 GC+SHH+1d culture GCCCCTAAAA (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGGCTGAAA (6) 1.2 0.0012 3T3 fibroblasts CCCAGCTTCC (8) 7 0.007 E15 cortex TATTAAATGT (10) 4.9 0.0049 Hypothalamus TATTAAATGT (10) 30.8 0.0308 Hypothalamus AAGGCTAAAA (5) 7.2 0.0072 Hypothalamus CAGATTAAAA (8) 3.6 0.0036 Hypothalamus CAGGGATCCG (4) 3.6 0.0036 Hypothalamus TTTCTTCTTT (11) 1.8 0.0018 E12.5 retina AAGGCTAAAA (5) 5.6 0.0056 E12.5 retina CCTCAAAAAA (12) 5.6 0.0056 E12.5 retina TTTCTTCTTT (11) 1.9 0.0019 E14.5 retina CAGATTAAAA (8) 1.8 0.0018 E16.5 retina TATTAAATGT (10) 5.4 0.0054 E16.5 retina AAGGCTAAAA (5) 1.8 0.0018 E16.5 retina CCTCAAAAAA (12) 1.8 0.0018 E16.5 retina GTGGCTGAAA (6) 1.8 0.0018 E16.5 retina TTTCTTCTTT (11) 1.8 0.0018 E18.5 retina TATTAAATGT (10) 14.6 0.0146 E18.5 retina AAGGCTAAAA (5) 1.8 0.0018 P0.5 retina TATTAAATGT (10) 5.9 0.0059 P0.5 retina AAGGCTAAAA (5) 2 0.002 P2.5 retina TATTAAATGT (10) 5.3 0.0053 P2.5 retina CCTCAAAAAA (12) 3.5 0.0035 P2.5 retina AAGGCTAAAA (5) 1.8 0.0018 P2.5 retina AGAAAATCCT (5) 1.8 0.0018 P2.5 retina CCCAGCTTCC (8) 1.8 0.0018 P4.5 retina TATTAAATGT (10) 4 0.004 P4.5 retina AAGGCTAAAA (5) 2 0.002 P4.5 retina CAAAGGAAGG (7) 2 0.002 P4.5 retina CCTCAAAAAA (12) 2 0.002 P6.5 retina AAGGCTAAAA (5) 8.3 0.0083 P6.5 retina TATTAAATGT (10) 8.3 0.0083 P6.5 retina CAAAGGAAGG (7) 1.7 0.0017 P6.5 retina CCTCAAAAAA (12) 1.7 0.0017 P10.5 crx- retina TATTAAATGT (10) 3.7 0.0037 P10.5 crx- retina AAGGCTAAAA (5) 1.9 0.0019 P10.5 crx- retina CAGGGATCCG (4) 1.9 0.0019 P10.5 crx- retina GTGGCTGAAA (6) 1.9 0.0019 P10.5 crx+ retina AAGGCTAAAA (5) 7.7 0.0077 P10.5 crx+ retina TATTAAATGT (10) 3.8 0.0038 P10.5 crx+ retina CCCAGCTTCC (8) 1.9 0.0019 P10.5 crx+ retina CCTCAAAAAA (12) 1.9 0.0019 Adult retinal AAGGCTAAAA (5) 5.6 0.0056 Adult retinal TATTAAATGT (10) 1.9 0.0019 ONL TATTAAATGT (10) 3.8 0.0038 ONL AAGGCTAAAA (5) 1.9 0.0019 ONL CCTCAAAAAA (12) 1.9 0.0019