Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.38016 Srebf2sterol regulatory element binding factor 2 15  15 E1 (15 48.5 cM)  20788 
 Gene Ontology cholesterol metabolism | DNA binding | DNA binding | endoplasmic reticulum | Golgi apparatus | integral to membrane | lipid metabolism | nucleus | nucleus | protein binding | regulation of transcription | regulation of transcription, DNA-dependent | transcription factor activity
 Human Homolog SREBF2[sterol regulatory element binding transcription factor 2]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTGCTGGACGT (3)17.90.0179
P8 Cb GCTACTGTCCTG (2)14.70.0147
P8 Cb GCAACACACACC (5)8.20.0082
P8 Cb GCGAGAGTAACA (4)4.90.0049
P8 Cb GCCTTCTCCTCA (3)1.60.0016
P8 Cb GCGCTGCCTCCC (7)1.60.0016
Cb medulloblastomaTGCTGGACGT (3)16.20.0162
Cb medulloblastomaGAGAGTAACA (4)6.90.0069
Cb medulloblastomaTACTGTCCTG (2)6.90.0069
Cb medulloblastomaAGGGAGGAGT (5)2.30.0023
Cb medulloblastomaGAGACCCTCA (4)2.30.0023
Cb medulloblastomaGTGCTGAAGC (6)2.30.0023
P8 GC+1d cultureTGCTGGACGT (3)51.40.0514
P8 GC+1d cultureTACTGTCCTG (2)11.40.0114
P8 GC+1d cultureGAGAGTAACA (4)80.008
P8 GC+1d cultureGAGACCCCTC (4)5.70.0057
P8 GC+1d cultureGGCAGAGCTC (3)5.70.0057
P8 GC+1d cultureAACACACACC (5)1.10.0011
P8 GC+1d cultureCTTCTCCTCA (3)1.10.0011
P8 GC+SHH+1d cultureTGCTGGACGT (3)45.70.0457
P8 GC+SHH+1d cultureGAGAGTAACA (4)10.50.0105
P8 GC+SHH+1d cultureTACTGTCCTG (2)8.20.0082
P8 GC+SHH+1d cultureGGCAGAGCTC (3)5.90.0059
P8 GC+SHH+1d cultureGAGACCCCTC (4)2.30.0023
P8 GC+SHH+1d cultureGTGAATGTTT (4)2.30.0023
P8 GC+SHH+1d cultureAGGGAGGAGG (3)1.20.0012
3T3 fibroblastsGAGAGTAACA (4)24.50.0245
3T3 fibroblastsAACACACACC (5)70.007
3T3 fibroblastsGGCAGAGCTC (3)70.007
3T3 fibroblastsAGGGAGGAGT (5)3.50.0035
3T3 fibroblastsGAGACCCCTC (4)3.50.0035
3T3 fibroblastsGCACACTGCA (5)3.50.0035
3T3 fibroblastsGTGCTGAAGC (6)3.50.0035
3T3 fibroblastsTGCTGGACGT (3)3.50.0035
E15 cortexTGCTGGACGT (3)9.90.0099
E15 cortexAGGGAGGAGT (5)4.90.0049
P1 cortexGAGAGTAACA (4)36.40.0364
P1 cortexTGCTGGACGT (3)9.10.0091
P1 cortexGAGACCCCTC (4)4.50.0045
HypothalamusGAGAGTAACA (4)7.20.0072
HypothalamusTACTGTCCTG (2)5.40.0054
HypothalamusGAGACCCCTC (4)3.60.0036
HypothalamusGCACACTGCA (5)1.80.0018
HypothalamusGCCATCAGCT (3)1.80.0018
HypothalamusTGCTGGACGT (3)1.80.0018
E12.5 retinaTGCTGGACGT (3)18.80.0188
E12.5 retinaGAGAGTAACA (4)3.80.0038
E12.5 retinaTACTGTCCTG (2)3.80.0038
E12.5 retinaAACACACACC (5)1.90.0019
E14.5 retinaTGCTGGACGT (3)12.80.0128
E14.5 retinaGAGAGTAACA (4)7.30.0073
E14.5 retinaTACTGTCCTG (2)3.60.0036
E14.5 retinaAACACACACC (5)1.80.0018
E14.5 retinaAGGGAGGAGG (3)1.80.0018
E14.5 retinaGAGACCCCTC (4)1.80.0018
E14.5 retinaGGCAGAGCTC (3)1.80.0018
E16.5 retinaTGCTGGACGT (3)19.90.0199
E16.5 retinaGAGAGTAACA (4)7.20.0072
E16.5 retinaCTTCTCCTCA (3)5.40.0054
E16.5 retinaTACTGTCCTG (2)5.40.0054
E16.5 retinaGAGACCCCTC (4)1.80.0018
E16.5 retinaGTGAATGTTT (4)1.80.0018
E16.5 retinaGTGCTGAAGC (6)1.80.0018
E16.5 retinaTGGGGAGCTT (2)1.80.0018
E18.5 retinaTGCTGGACGT (3)21.80.0218
E18.5 retinaGAGAGTAACA (4)5.50.0055
E18.5 retinaGAGACCCCTC (4)3.60.0036
E18.5 retinaTACTGTCCTG (2)3.60.0036
E18.5 retinaGTGCTGAAGC (6)1.80.0018
P0.5 retinaGAGAGTAACA (4)13.70.0137
P0.5 retinaTGCTGGACGT (3)9.80.0098
P0.5 retinaAACACACACC (5)5.90.0059
P0.5 retinaGCTGCCTCCC (7)3.90.0039
P0.5 retinaTGGGGAGCTT (2)3.90.0039
P0.5 retinaAGGGAGGAGG (3)20.002
P0.5 retinaGAGACCCCTC (4)20.002
P0.5 retinaGTGCTGAAGC (6)20.002
P2.5 retinaTGCTGGACGT (3)22.90.0229
P2.5 retinaGAGAGTAACA (4)3.50.0035
P2.5 retinaGTGCTGAAGC (6)3.50.0035
P2.5 retinaAACACACACC (5)1.80.0018
P2.5 retinaGCCATCAGCT (3)1.80.0018
P2.5 retinaTACTGTCCTG (2)1.80.0018
P4.5 retinaTGCTGGACGT (3)9.90.0099
P4.5 retinaTACTGTCCTG (2)7.90.0079
P4.5 retinaGAGAGTAACA (4)5.90.0059
P4.5 retinaGTGCTGAAGC (6)40.004
P4.5 retinaAACACACACC (5)20.002
P4.5 retinaGAGACCCCTC (4)20.002
P4.5 retinaGCCATCAGCT (3)20.002
P4.5 retinaGCTGCCTCCC (7)20.002
P6.5 retinaTGCTGGACGT (3)8.30.0083
P6.5 retinaGTGCTGAAGC (6)50.005
P6.5 retinaTACTGTCCTG (2)50.005
P6.5 retinaGAGAGTAACA (4)3.30.0033
P6.5 retinaAACACACACC (5)1.70.0017
P6.5 retinaGCACACTGCA (5)1.70.0017
P10.5 crx- retinaGAGAGTAACA (4)16.70.0167
P10.5 crx- retinaTGCTGGACGT (3)9.30.0093
P10.5 crx- retinaAACACACACC (5)7.40.0074
P10.5 crx- retinaGTGAATGTTT (4)1.90.0019
P10.5 crx- retinaGTGCTGAAGC (6)1.90.0019
P10.5 crx+ retinaGAGAGTAACA (4)5.80.0058
P10.5 crx+ retinaTGCTGGACGT (3)3.80.0038
P10.5 crx+ retinaAACACACACC (5)1.90.0019
P10.5 crx+ retinaGGCAGAGCTC (3)1.90.0019
P10.5 crx+ retinaGTGCTGAAGC (6)1.90.0019
Adult retinalAACACACACC (5)7.40.0074
Adult retinalTGCTGGACGT (3)3.70.0037
Adult retinalGAGACCCCTC (4)1.90.0019
Adult retinalGAGAGTAACA (4)1.90.0019
Adult retinalGCTGCCTCCC (7)1.90.0019
Adult retinalTACTGTCCTG (2)1.90.0019
ONLCTCAGGCCAT (2)5.70.0057
ONLAACACACACC (5)1.90.0019
ONLGAGAGTAACA (4)1.90.0019
ONLGCACACTGCA (5)1.90.0019
ONLTACTGTCCTG (2)1.90.0019
ONLTGCTGGACGT (3)1.90.0019