Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3819	Col12a1	procollagen, type XII, alpha 1	9	9 43.0 cM	12816
Mm.3819	AW743884	expressed sequence AW743884	9		102813
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGAAAAATA (3) 3.3 0.0033 Cb medulloblastoma TGCCCATCAG (2) 46.2 0.0462 Cb medulloblastoma ATAAAAAAGA (3) 4.6 0.0046 Cb medulloblastoma ATGCTGTATA (2) 2.3 0.0023 Cb medulloblastoma CAGAATGCTG (2) 2.3 0.0023 Cb medulloblastoma TACATACTCC (4) 2.3 0.0023 Cb medulloblastoma TGGAAAAATA (3) 2.3 0.0023 P8 GC+1d culture TGCCCATCAG (2) 4.6 0.0046 P8 GC+1d culture ATAAAAAAGA (3) 2.3 0.0023 P8 GC+1d culture CAGAATGCTG (2) 2.3 0.0023 P8 GC+1d culture ATGCTGTATA (2) 1.1 0.0011 P8 GC+1d culture CAGACCAGGC (2) 1.1 0.0011 P8 GC+SHH+1d culture ATGCTGTATA (2) 3.5 0.0035 P8 GC+SHH+1d culture ATAAAAAAGA (3) 2.3 0.0023 P8 GC+SHH+1d culture ACGCTTGGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture CAGAATGCTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGCCCATCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGAAAAATA (3) 1.2 0.0012 P1 cortex CAGAATGCTG (2) 4.5 0.0045 Hypothalamus TGCCCATCAG (2) 5.4 0.0054 Hypothalamus CAGAATGCTG (2) 3.6 0.0036 Hypothalamus TACATACTCC (4) 3.6 0.0036 Hypothalamus ATAAAAAAGA (3) 1.8 0.0018 E12.5 retina ATAAAAAAGA (3) 1.9 0.0019 E12.5 retina CAGAATGCTG (2) 1.9 0.0019 E12.5 retina TGCCCATCAG (2) 1.9 0.0019 E14.5 retina ATGCTGTATA (2) 1.8 0.0018 E18.5 retina CAGAATGCTG (2) 1.8 0.0018 E18.5 retina TGCCCATCAG (2) 1.8 0.0018 P0.5 retina CAGAATGCTG (2) 3.9 0.0039 P0.5 retina TGCCCATCAG (2) 2 0.002 P2.5 retina CAGAATGCTG (2) 5.3 0.0053 P2.5 retina ACGCTTGGTG (3) 1.8 0.0018 P2.5 retina ATAAAAAAGA (3) 1.8 0.0018 P2.5 retina TGCCCATCAG (2) 1.8 0.0018 P4.5 retina CAGAATGCTG (2) 4 0.004 P4.5 retina ATAAAAAAGA (3) 2 0.002 P6.5 retina CAGAATGCTG (2) 5 0.005 P6.5 retina ATAAAAAAGA (3) 3.3 0.0033 P10.5 crx- retina CAGAATGCTG (2) 5.6 0.0056 P10.5 crx- retina ATAAAAAAGA (3) 1.9 0.0019 P10.5 crx- retina TGCCCATCAG (2) 1.9 0.0019 P10.5 crx+ retina TGCCCATCAG (2) 13.5 0.0135 P10.5 crx+ retina CAGAATGCTG (2) 5.8 0.0058 P10.5 crx+ retina ACGCTTGGTG (3) 1.9 0.0019 P10.5 crx+ retina ATGCTGTATA (2) 1.9 0.0019 P10.5 crx+ retina CAGACCAGGC (2) 1.9 0.0019 Adult retinal CAGAATGCTG (2) 13 0.013 Adult retinal TGCCCATCAG (2) 1.9 0.0019 ONL ATAAAAAAGA (3) 5.7 0.0057 ONL CAGACCAGGC (2) 1.9 0.0019