Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.3819 Col12a1procollagen, type XII, alpha 1 9  9 43.0 cM  12816 
 Mm.3819 AW743884expressed sequence AW743884 9    102813 
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 173 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAATCTGAGGA
GAATAATGAA
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCGCGTGT
TGGAAAAATA (3)
TTTTTTTTTT (2)
24.40.0244
Cb medulloblastomaATAAAAAAGA (3)
ATGCTGTATA (2)
CAGAATGCTG (2)
CAGATGTATG
GTGGCTCTGT (2)
TACATACTCC (4)
TGCATCAAGG
TGCCCATCAG (2)
TGCCGCGTGT
TGGAAAAATA (3)
TTTGGCAAAA (2)
TTTTAATGAA
TTTTTTTTTT (2)
80.70.0807
P8 GC+1d cultureATAAAAAAGA (3)
ATGCTGTATA (2)
CAGAATGCTG (2)
CAGACCAGGC (2)
CCTGTGAGGG
CTGTGGAATG
GCCCCGCCCC
GGACCCGGAA (2)
GTGGCTCTGT (2)
TACAAGGCCT
TGCCCATCAG (2)
TGCCGCGTGT
TTTGGCAAAA (2)
TTTTTTTTTT (2)
39.80.0398
P8 GC+SHH+1d cultureACGCTTGGTG (3)
ATAAAAAAGA (3)
ATGCTGTATA (2)
CAGAATGCTG (2)
CAGATGTATG
CCTGTGAGGG
CTGTGGAATG
GAATAATGAA
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCCATCAG (2)
TGCCGCGTGT
TGGAAAAATA (3)
TTTGGCAAAA (2)
TTTTTTTTTT (2)
35.10.0351
3T3 fibroblastsCCTGTGAGGG
GGACCCGGAA (2)
GTGGCTCTGT (2)
TACAAGGCCT
17.50.0175
E15 cortexGTGGCTCTGT (2)
TGCATCAAGG
TGCCGCGTGT
TTTTTTTTTT (2)
24.60.0246
P1 cortexAATCTGAGGA
CAGAATGCTG (2)
CAGATGTATG
GCCCCGCCCC
TTTGGCAAAA (2)
TTTTTTTTTT (2)
36.10.0361
HypothalamusATAAAAAAGA (3)
CAGAATGCTG (2)
CAGATGTATG
CTGTGGAATG
GGACCCGGAA (2)
TACATACTCC (4)
TGCCCATCAG (2)
TGCCGCGTGT
TTTACAAAAA (2)
TTTTAATGAA
TTTTTTTTTT (2)
32.40.0324
E12.5 retinaATAAAAAAGA (3)
CAGAATGCTG (2)
GGACCCGGAA (2)
TGCCCATCAG (2)
TGCCGCGTGT
TTTTAATGAA
TTTTTTTTTT (2)
22.60.0226
E14.5 retinaAATCTGAGGA
ATGCTGTATA (2)
GGACCCGGAA (2)
TTTTTTTTTT (2)
34.60.0346
E16.5 retinaATTACGCCAA
CCCCACCCTT
GCCCCGCCCC
GGACCCGGAA (2)
TTTACAAAAA (2)
TTTTTTTTTT (2)
27.10.0271
E18.5 retinaCAGAATGCTG (2)
GAATAATGAA
GCCCCGCCCC
GGACCCGGAA (2)
TGCCCATCAG (2)
TTTTTTTTTT (2)
30.80.0308
P0.5 retinaATTACGCCAA
CAGAATGCTG (2)
CTGTGGAATG
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCCATCAG (2)
TGCCGCGTGT
TTTTTTTTTT (2)
27.60.0276
P2.5 retinaAACAAGTAGA
ACGCTTGGTG (3)
ATAAAAAAGA (3)
CAGAATGCTG (2)
CAGAATGTGT (2)
CAGATGTATG
CCCCACCCTT
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCCATCAG (2)
TGCCGCGTGT
TTTTTTTTTT (2)
390.039
P4.5 retinaATAAAAAAGA (3)
CAGAATGCTG (2)
GCCCCGCCCC
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCGCGTGT
TTTTAATGAA
TTTTTTTTTT (2)
29.90.0299
P6.5 retinaAACAAGTAGA
ATAAAAAAGA (3)
CAGAATGCTG (2)
CAGATGTATG
CTGTGGAATG
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCGCGTGT
TTTACAAAAA (2)
TTTTAATGAA
TTTTTTTTTT (2)
35.10.0351
P10.5 crx- retinaAATCTGAGGA
ATAAAAAAGA (3)
CAGAATGCTG (2)
CAGATGTATG
CTGTGGAATG
GGACCCGGAA (2)
GTGGCTCTGT (2)
TGCCCATCAG (2)
TGCCGCGTGT
24.50.0245
P10.5 crx+ retinaAACAAGTAGA
AATCTGAGGA
ACGCTTGGTG (3)
ATGCTGTATA (2)
CAGAATGCTG (2)
CAGACCAGGC (2)
CAGATGTATG
GGACCCGGAA (2)
GTGGCTCTGT (2)
TACAAGGCCT
TGCATCAAGG
TGCCCATCAG (2)
TGCCGCGTGT
TTTTTTTTTT (2)
65.20.0652
Adult retinalATTACGCCAA
CAGAATGCTG (2)
CAGAATGTGT (2)
CAGATGTATG
GCCCCGCCCC
GGACCCGGAA (2)
TGCCCATCAG (2)
TTTTTTTTTT (2)
35.40.0354
ONLATAAAAAAGA (3)
CAGAATGTGT (2)
CAGACCAGGC (2)
CAGATGTATG
GTGGCTCTGT (2)
TTTTTTTTTT (2)
17.10.0171