| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGAACTGG (3) CTCCTGCAGC (2) GCTGCTTCTC (2)
| 30.9 | 0.0309 |
| Cb medulloblastoma | ACCTGCATCT (2) CTCCTGCAGC (2) TGCCAGCCTG
| 32.3 | 0.0323 |
| P8 GC+1d culture | AATGAACTGG (3) ACCTGCATCT (2) CTCCTGCAGC (2)
| 46.8 | 0.0468 |
| P8 GC+SHH+1d culture | ACCTGCATCT (2) CTCCTGCAGC (2) TGCCAGCCTG
| 44.5 | 0.0445 |
| 3T3 fibroblasts | ACCTGCATCT (2) CTCCTGCAGC (2)
| 59.6 | 0.0596 |
| E15 cortex | ACCTGCATCT (2) CTCCTGCAGC (2)
| 29.6 | 0.0296 |
| P1 cortex | ACCTGCATCT (2) CTCCTGCAGC (2) TGCCAGCCTG
| 59 | 0.059 |
| Hypothalamus | ACCTGCATCT (2) CTCCTGCAGC (2)
| 25.3 | 0.0253 |
| E12.5 retina | ACCTGCATCT (2) CTCCTGCAGC (2) TGCCAGCCTG
| 30.1 | 0.0301 |
| E14.5 retina | AATGAACTGG (3) ACCTGCATCT (2) CTCCTGCAGC (2) GCTGCTTCTC (2) TGCCAGCCTG
| 36.4 | 0.0364 |
| E16.5 retina | ACCTGCATCT (2) CTCCTGCAGC (2) TGCCAGCCTG
| 43.4 | 0.0434 |
| E18.5 retina | CTCCTGCAGC (2) TGCCAGCCTG
| 41.8 | 0.0418 |
| P0.5 retina | ACCTGCATCT (2) CTCCTGCAGC (2)
| 23.6 | 0.0236 |
| P2.5 retina | AATGAACTGG (3) ACCTGCATCT (2) CTCCTGCAGC (2) GCTGCTTCTC (2) TGCCAGCCTG
| 33.6 | 0.0336 |
| P4.5 retina | AATGAACTGG (3) ACCTGCATCT (2) CTCCTGCAGC (2)
| 13.9 | 0.0139 |
| P6.5 retina | ACCTGCATCT (2) CTCCTGCAGC (2) GCTGCTTCTC (2) TGCCAGCCTG
| 41.8 | 0.0418 |
| P10.5 crx- retina | ACCTGCATCT (2) CTCCTGCAGC (2)
| 16.7 | 0.0167 |
| P10.5 crx+ retina | ACCTGCATCT (2) CTCCTGCAGC (2) GCTGCTTCTC (2)
| 26.9 | 0.0269 |
| Adult retinal | AATGAACTGG (3) ACCTGCATCT (2) CTCCTGCAGC (2)
| 22.2 | 0.0222 |
| ONL | ACCTGCATCT (2) TGCCAGCCTG
| 5.7 | 0.0057 |