Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38469	Apbb1	amyloid beta (A4) precursor protein-binding, family B, member 1	7	7 46.6 cM	11785
Gene Ontology	beta-amyloid binding | protein binding
Human Homolog	APBB1[amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATCCCCTCT (2) 31 0.031 Cb medulloblastoma GATCCCCTCT (2) 34.7 0.0347 Cb medulloblastoma AGGGGCCAGA (5) 11.6 0.0116 P8 GC+1d culture GATCCCCTCT (2) 43.4 0.0434 P8 GC+1d culture AGGGGCCAGA (5) 2.3 0.0023 P8 GC+SHH+1d culture GATCCCCTCT (2) 39.8 0.0398 P8 GC+SHH+1d culture AGGGGCCAGA (5) 2.3 0.0023 P8 GC+SHH+1d culture TCATCAGTCC 1.2 0.0012 3T3 fibroblasts AGGGGCCAGA (5) 7 0.007 3T3 fibroblasts GCTGGGGGCT (5) 3.5 0.0035 E15 cortex GATCCCCTCT (2) 24.7 0.0247 P1 cortex GATCCCCTCT (2) 27.3 0.0273 Hypothalamus GATCCCCTCT (2) 16.3 0.0163 Hypothalamus AGGGGCCAGA (5) 9.1 0.0091 Hypothalamus TTTTGGTGTG (5) 5.4 0.0054 Hypothalamus AGGAACAGAA (6) 3.6 0.0036 Hypothalamus AGACCAGTCC (3) 1.8 0.0018 Hypothalamus GCTGGGGGCT (5) 1.8 0.0018 Hypothalamus TCATCAGTCC 1.8 0.0018 E12.5 retina GATCCCCTCT (2) 22.5 0.0225 E12.5 retina AGGGGCCAGA (5) 3.8 0.0038 E12.5 retina AGGAACAGAA (6) 1.9 0.0019 E14.5 retina GATCCCCTCT (2) 27.3 0.0273 E14.5 retina AGACCAGTCC (3) 1.8 0.0018 E16.5 retina GATCCCCTCT (2) 23.5 0.0235 E16.5 retina TCATCAGTCC 3.6 0.0036 E16.5 retina AGACCAGTCC (3) 1.8 0.0018 E18.5 retina GATCCCCTCT (2) 27.3 0.0273 E18.5 retina AAGAACTCCC (4) 1.8 0.0018 E18.5 retina TCATCAGTCC 1.8 0.0018 P0.5 retina GATCCCCTCT (2) 21.6 0.0216 P0.5 retina AGGGGCCAGA (5) 2 0.002 P2.5 retina GATCCCCTCT (2) 42.2 0.0422 P4.5 retina GATCCCCTCT (2) 49.5 0.0495 P4.5 retina TTTTGGTGTG (5) 2 0.002 P6.5 retina GATCCCCTCT (2) 51.7 0.0517 P6.5 retina AGGGGCCAGA (5) 5 0.005 P6.5 retina TCATCAGTCC 1.7 0.0017 P10.5 crx- retina GATCCCCTCT (2) 78 0.078 P10.5 crx- retina TCATCAGTCC 3.7 0.0037 P10.5 crx- retina AGACCAGTCC (3) 1.9 0.0019 P10.5 crx- retina AGGGGCCAGA (5) 1.9 0.0019 P10.5 crx+ retina GATCCCCTCT (2) 51.9 0.0519 P10.5 crx+ retina AGGGGCCAGA (5) 1.9 0.0019 P10.5 crx+ retina TCATCAGTCC 1.9 0.0019 P10.5 crx+ retina TTTTGGTGTG (5) 1.9 0.0019 Adult retinal GATCCCCTCT (2) 18.5 0.0185 Adult retinal AGGGGCCAGA (5) 7.4 0.0074 ONL AAGAACTCCC (4) 9.6 0.0096 ONL GATCCCCTCT (2) 7.7 0.0077 ONL AGGGGCCAGA (5) 3.8 0.0038