Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3868	Yy1	YY1 transcription factor	12	12 53.0 cM	22632
Gene Ontology	DNA binding | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | zinc ion binding
Human Homolog	YY1[YY1 transcription factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACAGTGGT 1.6 0.0016 P8 Cb GC AACTTCGCAT 1.6 0.0016 P8 Cb GC CATACTTCAA 1.6 0.0016 P8 Cb GC TAACTGCCCA 1.6 0.0016 P8 Cb GC TTTTGATAAA (3) 1.6 0.0016 Cb medulloblastoma GCTCTATACA (3) 6.9 0.0069 P8 GC+1d culture GTGAGGCCTC (2) 2.3 0.0023 P8 GC+1d culture TAGAATCAAA 2.3 0.0023 P8 GC+1d culture GCTCTATACA (3) 1.1 0.0011 P8 GC+1d culture TAACTGCCCA 1.1 0.0011 P8 GC+SHH+1d culture GCTCTATACA (3) 5.9 0.0059 P8 GC+SHH+1d culture GTGAGGCCTC (2) 4.7 0.0047 P8 GC+SHH+1d culture TAGAATCAAA 2.3 0.0023 P8 GC+SHH+1d culture AACTTCGCAT 1.2 0.0012 P8 GC+SHH+1d culture TAACTGCCCA 1.2 0.0012 P8 GC+SHH+1d culture TGTGACCTCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTGGATAAA (2) 1.2 0.0012 3T3 fibroblasts GTGAGGCCTC (2) 3.5 0.0035 E15 cortex AAACAGTGGT 4.9 0.0049 E15 cortex GTGAGGCCTC (2) 4.9 0.0049 E15 cortex TAGAATCAAA 4.9 0.0049 P1 cortex TAACTGCCCA 4.5 0.0045 P1 cortex TAGAATCAAA 4.5 0.0045 P1 cortex TGTGACCTCT (3) 4.5 0.0045 P1 cortex TTTTGATAAA (3) 4.5 0.0045 Hypothalamus GCTCTATACA (3) 5.4 0.0054 Hypothalamus TAGAATCAAA 3.6 0.0036 Hypothalamus AACTTCGCAT 1.8 0.0018 Hypothalamus GTGAGGCCTC (2) 1.8 0.0018 E12.5 retina GCTCTATACA (3) 5.6 0.0056 E12.5 retina TAACTGCCCA 3.8 0.0038 E12.5 retina AACTTCGCAT 1.9 0.0019 E12.5 retina TAGAATCAAA 1.9 0.0019 E14.5 retina GCTCTATACA (3) 5.5 0.0055 E14.5 retina TGTGACCTCT (3) 3.6 0.0036 E14.5 retina AAACAGTGGT 1.8 0.0018 E14.5 retina TAGAATCAAA 1.8 0.0018 E16.5 retina GCTCTATACA (3) 5.4 0.0054 E16.5 retina ATTCAATACA (2) 1.8 0.0018 E16.5 retina TTTTGATAAA (3) 1.8 0.0018 E18.5 retina ATTCAATACA (2) 1.8 0.0018 E18.5 retina GCTCTATACA (3) 1.8 0.0018 E18.5 retina TGTGACCTCT (3) 1.8 0.0018 E18.5 retina TTTTGATAAA (3) 1.8 0.0018 P0.5 retina GCTCTATACA (3) 2 0.002 P0.5 retina GTGAGGCCTC (2) 2 0.002 P2.5 retina GCTCTATACA (3) 14.1 0.0141 P2.5 retina TGTGACCTCT (3) 1.8 0.0018 P2.5 retina TTTTGATAAA (3) 1.8 0.0018 P4.5 retina GCTCTATACA (3) 5.9 0.0059 P4.5 retina TAGAATCAAA 4 0.004 P4.5 retina ATTCAATACA (2) 2 0.002 P4.5 retina GTGAGGCCTC (2) 2 0.002 P4.5 retina TAACTGCCCA 2 0.002 P4.5 retina TGTGACCTCT (3) 2 0.002 P6.5 retina GCTCTATACA (3) 5 0.005 P6.5 retina TAGAATCAAA 3.3 0.0033 P6.5 retina TGTGACCTCT (3) 3.3 0.0033 P10.5 crx- retina GCTCTATACA (3) 1.9 0.0019 P10.5 crx- retina TAGAATCAAA 1.9 0.0019 P10.5 crx+ retina GCTCTATACA (3) 5.8 0.0058 P10.5 crx+ retina TTTGGATAAA (2) 3.8 0.0038 P10.5 crx+ retina CATACTTCAA 1.9 0.0019 Adult retinal CATACTTCAA 3.7 0.0037 Adult retinal AACTTCGCAT 1.9 0.0019 Adult retinal TGTGACCTCT (3) 1.9 0.0019 Adult retinal TTTTGATAAA (3) 1.9 0.0019 ONL GCTCTATACA (3) 5.7 0.0057 ONL TAACTGCCCA 1.9 0.0019 ONL TGTGACCTCT (3) 1.9 0.0019