Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.38801
1200015A22Rik
RIKEN cDNA 1200015A22 gene
6
74122
Gene Ontology
integral to membrane
Human Homolog
MGC3222[hypothetical protein MGC3222]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGTTTCTTT
GTCCTCAGGA
(
2
)
16.3
0.0163
Cb medulloblastoma
AGGTTTCTTT
2.3
0.0023
P8 GC+1d culture
AAACAGGGCT (
2
)
AGGTTTCTTT
GTCCTCAGGA
(
2
)
GTTTCTCAAA
(
2
)
7.9
0.0079
P8 GC+SHH+1d culture
AGGTTTCTTT
10.5
0.0105
E15 cortex
AGGTTTCTTT
4.9
0.0049
P1 cortex
GTTTCTCAAA
(
2
)
4.5
0.0045
Hypothalamus
AGGTTTCTTT
GTCCTCAGGA
(
2
)
5.4
0.0054
E12.5 retina
AGGTTTCTTT
GTCCTCAGGA
(
2
)
5.7
0.0057
E14.5 retina
AGGTTTCTTT
TCCTGAGCCT
TGGACCATCA (
2
)
9.1
0.0091
E16.5 retina
AGGTTTCTTT
3.6
0.0036
E18.5 retina
AGGTTTCTTT
TGGACCATCA (
2
)
7.2
0.0072
P0.5 retina
AGGTTTCTTT
2
0.002
P2.5 retina
GTCCTCAGGA
(
2
)
1.8
0.0018
P4.5 retina
AAACAGGGCT (
2
)
AGGTTTCTTT
GTCCTCAGGA
(
2
)
GTTTCTCAAA
(
2
)
TCCTGAGCCT
14
0.014
P6.5 retina
AGGTTTCTTT
GTCCTCAGGA
(
2
)
TCCTGAGCCT
6.7
0.0067
P10.5 crx- retina
AAACAGGGCT (
2
)
AGGTTTCTTT
TCCTGAGCCT
5.7
0.0057
P10.5 crx+ retina
AGGTTTCTTT
GTCCTCAGGA
(
2
)
GTTTCTCAAA
(
2
)
TGGACCATCA (
2
)
9.5
0.0095
Adult retinal
AAACAGGGCT (
2
)
GTCCTCAGGA
(
2
)
7.5
0.0075
ONL
AAACAGGGCT (
2
)
1.9
0.0019
