Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38813	AI265322	expressed sequence AI265322	17		106543
Mm.38813	9030612M13Rik	RIKEN cDNA 9030612M13 gene	17		208292
Gene Ontology	intracellular | nucleic acid binding | regulation of transcription, DNA-dependent
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC GTTCTCCAAA (5) 4.9 0.0049 P8 Cb GC CTGTAATTTT (4) 1.6 0.0016 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma GTTCTCCAAA (5) 9.2 0.0092 Cb medulloblastoma TAAATAAAGT (3) 2.3 0.0023 Cb medulloblastoma TGACTCTAGT (4) 2.3 0.0023 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture GTTCTCCAAA (5) 3.4 0.0034 P8 GC+1d culture ATTTTATTGA (10) 2.3 0.0023 P8 GC+1d culture ATTCTCTTTT (7) 1.1 0.0011 P8 GC+1d culture GATGTAAAAA (4) 1.1 0.0011 P8 GC+1d culture TCAAAAGAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture GTTCTCCAAA (5) 10.5 0.0105 P8 GC+SHH+1d culture CTGTAATTTT (4) 4.7 0.0047 P8 GC+SHH+1d culture TAAATAAAGT (3) 3.5 0.0035 P8 GC+SHH+1d culture ATTTTATTGA (10) 2.3 0.0023 P8 GC+SHH+1d culture GATGTAAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGAAGTCT (6) 1.2 0.0012 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 3T3 fibroblasts ATTCTCTTTT (7) 3.5 0.0035 3T3 fibroblasts GTTCTCCAAA (5) 3.5 0.0035 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 E15 cortex GTTCTCCAAA (5) 9.9 0.0099 E15 cortex AGTCTGGGGC (6) 4.9 0.0049 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 P1 cortex GTTCTCCAAA (5) 13.6 0.0136 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus GTTCTCCAAA (5) 3.6 0.0036 Hypothalamus ATTCTCTTTT (7) 1.8 0.0018 Hypothalamus GATGTAAAAA (4) 1.8 0.0018 Hypothalamus TCAAAAGAAA (4) 1.8 0.0018 Hypothalamus TGACTCTAGT (4) 1.8 0.0018 Hypothalamus TGTGAAGTCT (6) 1.8 0.0018 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E12.5 retina GTTCTCCAAA (5) 3.8 0.0038 E12.5 retina TCAAAAGAAA (4) 3.8 0.0038 E12.5 retina ATTTTATTGA (10) 1.9 0.0019 E12.5 retina GATGTAAAAA (4) 1.9 0.0019 E12.5 retina TGACTCTAGT (4) 1.9 0.0019 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E14.5 retina AGTCTGGGGC (6) 1.8 0.0018 E14.5 retina ATTCTCTTTT (7) 1.8 0.0018 E14.5 retina GTTCTCCAAA (5) 1.8 0.0018 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina CTGTAATTTT (4) 5.4 0.0054 E16.5 retina TGTGAAGTCT (6) 5.4 0.0054 E16.5 retina AGTCTGGGGC (6) 3.6 0.0036 E16.5 retina TAAATAAAGT (3) 3.6 0.0036 E16.5 retina GTTCTCCAAA (5) 1.8 0.0018 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina GTTCTCCAAA (5) 12.7 0.0127 E18.5 retina CTGTAATTTT (4) 7.3 0.0073 E18.5 retina GATGTAAAAA (4) 5.5 0.0055 E18.5 retina ATTCTCTTTT (7) 1.8 0.0018 E18.5 retina TAAATAAAGT (3) 1.8 0.0018 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P0.5 retina GTTCTCCAAA (5) 5.9 0.0059 P0.5 retina CTGTAATTTT (4) 3.9 0.0039 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina GTTCTCCAAA (5) 8.8 0.0088 P2.5 retina GATGTAAAAA (4) 3.5 0.0035 P2.5 retina TAAATAAAGT (3) 3.5 0.0035 P2.5 retina TGACTCTAGT (4) 3.5 0.0035 P2.5 retina CTGTAATTTT (4) 1.8 0.0018 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina GTTCTCCAAA (5) 11.9 0.0119 P4.5 retina ATTTTATTGA (10) 2 0.002 P4.5 retina GATGTAAAAA (4) 2 0.002 P4.5 retina TAAATAAAGT (3) 2 0.002 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina GTTCTCCAAA (5) 8.3 0.0083 P6.5 retina GATGTAAAAA (4) 3.3 0.0033 P6.5 retina ATTTTATTGA (10) 1.7 0.0017 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina GTTCTCCAAA (5) 7.4 0.0074 P10.5 crx- retina GATGTAAAAA (4) 1.9 0.0019 P10.5 crx- retina TAAATAAAGT (3) 1.9 0.0019 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina GTTCTCCAAA (5) 11.5 0.0115 P10.5 crx+ retina GATGTAAAAA (4) 5.8 0.0058 P10.5 crx+ retina CTGTAATTTT (4) 1.9 0.0019 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal GTTCTCCAAA (5) 11.1 0.0111 Adult retinal CTGTAATTTT (4) 3.7 0.0037 Adult retinal GATGTAAAAA (4) 1.9 0.0019 Adult retinal TAAATAAAGT (3) 1.9 0.0019 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL GTTCTCCAAA (5) 7.7 0.0077 ONL GATGTAAAAA (4) 5.7 0.0057 ONL CTGTAATTTT (4) 1.9 0.0019