Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3918	Abca4	ATP-binding cassette, sub-family A (ABC1), member 4	3	3 61.8 cM	11304
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | integral to membrane | integral to plasma membrane | membrane | phospholipid transfer to membrane | phospholipid transporter activity | transport | vision
Human Homolog	ABCA4[ATP-binding cassette, sub-family A (ABC1), member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture TCTTATAATT (5) 1.1 0.0011 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 Hypothalamus CGTGTGTGTG (5) 1.8 0.0018 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina TCTTATAATT (5) 1.8 0.0018 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P2.5 retina TCTTATAATT (5) 1.8 0.0018 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina CGTGTGTGTG (5) 1.7 0.0017 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina CGTGTGTGTG (5) 9.3 0.0093 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina CGTGTGTGTG (5) 1.9 0.0019 P10.5 crx+ retina CTCCAGTTCC (4) 1.9 0.0019 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal CTCCAGTTCC (4) 13 0.013 Adult retinal CGTGTGTGTG (5) 9.3 0.0093 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL CGTGTGTGTG (5) 7.7 0.0077 ONL CTCCAGTTCC (4) 7.7 0.0077