Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3921	Casp2	caspase 2	6	6 20.5 cM	12366
Gene Ontology	apoptosis | caspase activity | cysteine-type peptidase activity | hydrolase activity | induction of apoptosis | induction of apoptosis | intracellular | negative regulation of apoptosis | nucleus | protein binding | proteolysis and peptidolysis | regulation of apoptosis
Human Homolog	CASP2[caspase 2, apoptosis-related cysteine protease (neural precursor cell expressed, developmentally down-regulated 2)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTTTCTG (4) 24.5 0.0245 P8 Cb GC AAGGCTTATT (5) 3.3 0.0033 P8 Cb GC GTGTGGAAGG (3) 3.3 0.0033 Cb medulloblastoma AATGTTTCTG (4) 6.9 0.0069 Cb medulloblastoma AAGGCTTATT (5) 4.6 0.0046 Cb medulloblastoma GTGTGGAAGG (3) 2.3 0.0023 P8 GC+1d culture GTGTGGAAGG (3) 2.3 0.0023 P8 GC+1d culture TGAAAGAAGT (4) 2.3 0.0023 P8 GC+1d culture AATGTTTCTG (4) 1.1 0.0011 P8 GC+1d culture CACTTACACT (2) 1.1 0.0011 P8 GC+SHH+1d culture AATGTTTCTG (4) 16.4 0.0164 P8 GC+SHH+1d culture TGAAAGAAGT (4) 2.3 0.0023 3T3 fibroblasts AATGTTTCTG (4) 7 0.007 3T3 fibroblasts AAGGCTTATT (5) 3.5 0.0035 3T3 fibroblasts GTGTGGAAGG (3) 3.5 0.0035 E15 cortex AAGGCTTATT (5) 9.9 0.0099 E15 cortex AATGTTTCTG (4) 9.9 0.0099 E15 cortex TGAAAGAAGT (4) 4.9 0.0049 P1 cortex AATGTTTCCT 9.1 0.0091 P1 cortex AATGTTTCTG (4) 4.5 0.0045 Hypothalamus AATGTTTCTG (4) 1.8 0.0018 Hypothalamus TGAAAGAAGT (4) 1.8 0.0018 E12.5 retina AATGTTTCTG (4) 28.2 0.0282 E12.5 retina AATGTTTCCT 1.9 0.0019 E14.5 retina AATGTTTCTG (4) 27.3 0.0273 E16.5 retina AATGTTTCTG (4) 32.6 0.0326 E18.5 retina AATGTTTCTG (4) 25.5 0.0255 E18.5 retina AAGGCTTATT (5) 1.8 0.0018 P0.5 retina AATGTTTCTG (4) 23.6 0.0236 P0.5 retina TGAAAGAAGT (4) 2 0.002 P2.5 retina AATGTTTCTG (4) 19.4 0.0194 P2.5 retina AAGGCTTATT (5) 5.3 0.0053 P2.5 retina AATGTTTCCT 1.8 0.0018 P2.5 retina TGAAAGAAGT (4) 1.8 0.0018 P4.5 retina AATGTTTCTG (4) 9.9 0.0099 P4.5 retina AAGGCTTATT (5) 7.9 0.0079 P4.5 retina AATGTTTCCT 2 0.002 P4.5 retina CACTTACACT (2) 2 0.002 P6.5 retina AATGTTTCTG (4) 6.7 0.0067 P6.5 retina AAGGCTTATT (5) 1.7 0.0017 P6.5 retina AATGTTTCCT 1.7 0.0017 P6.5 retina CACTTACACT (2) 1.7 0.0017 P10.5 crx- retina AATGTTTCTG (4) 16.7 0.0167 P10.5 crx- retina AAGGCTTATT (5) 3.7 0.0037 P10.5 crx- retina GTGTGGAAGG (3) 1.9 0.0019 P10.5 crx+ retina AATGTTTCTG (4) 5.8 0.0058 P10.5 crx+ retina AAGGCTTATT (5) 3.8 0.0038 Adult retinal AATGTTTCTG (4) 3.7 0.0037 Adult retinal GTGTGGAAGG (3) 3.7 0.0037 Adult retinal TGAAAGAAGT (4) 3.7 0.0037 ONL AATGTTTCTG (4) 7.7 0.0077 ONL CACTTACACT (2) 1.9 0.0019