Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.39293	Ccdc5	coiled-coil domain containing 5	18		225745
Gene Ontology	cell cycle | cellular_component unknown | mitosis | molecular_function unknown
Human Homolog	CCDC5[coiled-coil domain containing 5 (spindle associated)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGGCAAAA (4) 21.2 0.0212 P8 Cb GC TAGACGTGGT 3.3 0.0033 P8 Cb GC TGTGTAGTTT (5) 1.6 0.0016 Cb medulloblastoma AAGGGCAAAA (4) 57.8 0.0578 Cb medulloblastoma TAGACGTGGT 2.3 0.0023 P8 GC+1d culture AAGGGCAAAA (4) 13.7 0.0137 P8 GC+1d culture TAGACGTGGT 2.3 0.0023 P8 GC+1d culture TGTGTAGTTT (5) 2.3 0.0023 P8 GC+SHH+1d culture AAGGGCAAAA (4) 11.7 0.0117 P8 GC+SHH+1d culture TAGACGTGGT 3.5 0.0035 P8 GC+SHH+1d culture TGTGTAGTTT (5) 3.5 0.0035 3T3 fibroblasts TAGACGTGGT 3.5 0.0035 E15 cortex AAGGGCAAAA (4) 4.9 0.0049 P1 cortex AAGGGCAAAA (4) 4.5 0.0045 Hypothalamus AAGGGCAAAA (4) 12.7 0.0127 Hypothalamus TGTGTAGTTT (5) 3.6 0.0036 E12.5 retina TAGACGTGGT 9.4 0.0094 E12.5 retina TGCATACAGT (3) 1.9 0.0019 E12.5 retina TGTGTAGTTT (5) 1.9 0.0019 E14.5 retina AAGGGCAAAA (4) 9.1 0.0091 E14.5 retina TGTGTAGTTT (5) 7.3 0.0073 E14.5 retina TAGACGTGGT 3.6 0.0036 E16.5 retina TGTGTAGTTT (5) 5.4 0.0054 E16.5 retina AAGGGCAAAA (4) 3.6 0.0036 E16.5 retina TAGACGTGGT 1.8 0.0018 E18.5 retina TAGACGTGGT 3.6 0.0036 E18.5 retina TGTGTAGTTT (5) 1.8 0.0018 P0.5 retina AAGGGCAAAA (4) 3.9 0.0039 P0.5 retina TGTGTAGTTT (5) 3.9 0.0039 P0.5 retina TGCATACAGT (3) 2 0.002 P2.5 retina AAGGGCAAAA (4) 7 0.007 P2.5 retina TAGACGTGGT 3.5 0.0035 P2.5 retina TGTGTAGTTT (5) 3.5 0.0035 P2.5 retina TGCATACAGT (3) 1.8 0.0018 P4.5 retina TGTGTAGTTT (5) 5.9 0.0059 P4.5 retina TAGACGTGGT 4 0.004 P4.5 retina TGCATACAGT (3) 2 0.002 P6.5 retina AAGGGCAAAA (4) 6.7 0.0067 P6.5 retina TAGACGTGGT 1.7 0.0017 P6.5 retina TGTGTAGTTT (5) 1.7 0.0017 P10.5 crx- retina AAGGGCAAAA (4) 1.9 0.0019 P10.5 crx- retina TGTGTAGTTT (5) 1.9 0.0019 Adult retinal AAGGGCAAAA (4) 1.9 0.0019 Adult retinal TAGACGTGGT 1.9 0.0019 Adult retinal TGTGTAGTTT (5) 1.9 0.0019 ONL TGTGTAGTTT (5) 3.8 0.0038