Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3935
Ddx24
DEAD (Asp-Glu-Ala-Asp) box polypeptide 24
12
27225
Mm.3935
9330161L09Rik
RIKEN cDNA 9330161L09 gene
12
77225
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGTGGAGTT
(
3
)
6.5
0.0065
P8 Cb GC
GACAGATGGA (
3
)
4.9
0.0049
P8 Cb GC
AAGGTGAAGG
(
5
)
1.6
0.0016
P8 Cb GC
GAACGCAAGT (
3
)
1.6
0.0016
P8 Cb GC
GATGGCCTGA (
6
)
1.6
0.0016
Cb medulloblastoma
TTGTGGAGTT
(
3
)
11.6
0.0116
Cb medulloblastoma
GACAGATGGA (
3
)
9.2
0.0092
Cb medulloblastoma
AAGGTGAAGG
(
5
)
2.3
0.0023
Cb medulloblastoma
TGTGCGGGAG
(
3
)
2.3
0.0023
P8 GC+1d culture
GACAGATGGA (
3
)
18.3
0.0183
P8 GC+1d culture
TTGTGGAGTT
(
3
)
8
0.008
P8 GC+1d culture
GCAACCTCCC (
8
)
5.7
0.0057
P8 GC+1d culture
GAACGCAAGT (
3
)
3.4
0.0034
P8 GC+1d culture
TGTGCGGGAG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GACAGATGGA (
3
)
11.7
0.0117
P8 GC+SHH+1d culture
TTGTGGAGTT
(
3
)
11.7
0.0117
P8 GC+SHH+1d culture
GCAACCTCCC (
8
)
8.2
0.0082
P8 GC+SHH+1d culture
GAACGCAAGT (
3
)
7
0.007
3T3 fibroblasts
GATGGCCTGA (
6
)
7
0.007
3T3 fibroblasts
TTGTGGAGTT
(
3
)
3.5
0.0035
E15 cortex
GACAGATGGA (
3
)
9.9
0.0099
E15 cortex
GCAACCTCCC (
8
)
4.9
0.0049
P1 cortex
GACAGATGGA (
3
)
9.1
0.0091
P1 cortex
GAACGCAAGT (
3
)
4.5
0.0045
P1 cortex
GCAACCTCCC (
8
)
4.5
0.0045
Hypothalamus
GACAGATGGA (
3
)
18.1
0.0181
Hypothalamus
TTGTGGAGTT
(
3
)
18.1
0.0181
Hypothalamus
GAACGCAAGT (
3
)
3.6
0.0036
Hypothalamus
TGTGCGGGAG
(
3
)
1.8
0.0018
E12.5 retina
TTGTGGAGTT
(
3
)
7.5
0.0075
E12.5 retina
GACAGATGGA (
3
)
3.8
0.0038
E12.5 retina
GCAACCTCCC (
8
)
1.9
0.0019
E14.5 retina
TTGTGGAGTT
(
3
)
5.5
0.0055
E14.5 retina
GACAGATGGA (
3
)
1.8
0.0018
E16.5 retina
TTGTGGAGTT
(
3
)
12.7
0.0127
E16.5 retina
GAACGCAAGT (
3
)
1.8
0.0018
E16.5 retina
GACAGATGGA (
3
)
1.8
0.0018
E18.5 retina
TTGTGGAGTT
(
3
)
9.1
0.0091
E18.5 retina
GAACGCAAGT (
3
)
5.5
0.0055
E18.5 retina
GACAGATGGA (
3
)
5.5
0.0055
E18.5 retina
GATGGCCTGA (
6
)
1.8
0.0018
P0.5 retina
GAACGCAAGT (
3
)
7.9
0.0079
P0.5 retina
GACAGATGGA (
3
)
3.9
0.0039
P0.5 retina
TTGTGGAGTT
(
3
)
3.9
0.0039
P2.5 retina
GACAGATGGA (
3
)
10.6
0.0106
P2.5 retina
TTGTGGAGTT
(
3
)
5.3
0.0053
P2.5 retina
GAACGCAAGT (
3
)
1.8
0.0018
P4.5 retina
GACAGATGGA (
3
)
9.9
0.0099
P4.5 retina
TTGTGGAGTT
(
3
)
5.9
0.0059
P4.5 retina
GAACGCAAGT (
3
)
4
0.004
P6.5 retina
GACAGATGGA (
3
)
13.3
0.0133
P6.5 retina
TTGTGGAGTT
(
3
)
8.3
0.0083
P6.5 retina
GAACGCAAGT (
3
)
6.7
0.0067
P10.5 crx- retina
TTGTGGAGTT
(
3
)
11.1
0.0111
P10.5 crx- retina
GACAGATGGA (
3
)
3.7
0.0037
P10.5 crx+ retina
TTGTGGAGTT
(
3
)
9.6
0.0096
P10.5 crx+ retina
GACAGATGGA (
3
)
3.8
0.0038
Adult retinal
GACAGATGGA (
3
)
14.8
0.0148
Adult retinal
GAACGCAAGT (
3
)
3.7
0.0037
Adult retinal
TTGTGGAGTT
(
3
)
1.9
0.0019
ONL
AAGGTGAAGG
(
5
)
9.6
0.0096
ONL
TTGTGGAGTT
(
3
)
7.7
0.0077
ONL
GACAGATGGA (
3
)
5.7
0.0057
