Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3941	D230015J17Rik	RIKEN cDNA D230015J17 gene	3		320331
Mm.3941	Eif4e	eukaryotic translation initiation factor 4E	3	12 25.0 cM	13684
Gene Ontology	cytoplasm | cytoplasm | protein biosynthesis | regulation of protein biosynthesis | regulation of translation | RNA binding | translation initiation factor activity | translational initiation
Human Homolog	EIF4E[eukaryotic translation initiation factor 4E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TTTGCTTTAA (10) 32.6 0.0326 P8 Cb GC CAGGAGCGGA (4) 4.9 0.0049 P8 Cb GC GCAGTGAGTG (5) 1.6 0.0016 P8 Cb GC GGGAAGACAC (2) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TTTGCTTTAA (10) 6.9 0.0069 Cb medulloblastoma CAGGAGCGGA (4) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTTGCTTTAA (10) 19.4 0.0194 P8 GC+1d culture CAGGAGCGGA (4) 1.1 0.0011 P8 GC+1d culture CGTTAGGGAC (2) 1.1 0.0011 P8 GC+1d culture TAATTACAAA (7) 1.1 0.0011 P8 GC+1d culture TAATTACACT (2) 1.1 0.0011 P8 GC+1d culture TATCAAAATA (4) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTTGCTTTAA (10) 38.6 0.0386 P8 GC+SHH+1d culture CAGGAGCGGA (4) 5.9 0.0059 P8 GC+SHH+1d culture CGTTAGGGAC (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAGTGAGTG (5) 1.2 0.0012 P8 GC+SHH+1d culture TAATTACACT (2) 1.2 0.0012 3T3 fibroblasts CAGGAGCGGA (4) 31.5 0.0315 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts GCAGTGAGTG (5) 3.5 0.0035 3T3 fibroblasts TTTGCTTTAA (10) 3.5 0.0035 E15 cortex CAGGAGCGGA (4) 19.8 0.0198 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex GCAGTGAGTG (5) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TTTGCTTTAA (10) 18.2 0.0182 P1 cortex CAGGAGCGGA (4) 13.6 0.0136 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTTGCTTTAA (10) 21.7 0.0217 Hypothalamus CAGGAGCGGA (4) 5.4 0.0054 Hypothalamus GGGTGTGGAA (4) 3.6 0.0036 Hypothalamus GTAATTCTAA (3) 3.6 0.0036 Hypothalamus CGTTAGGGAC (2) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTTGCTTTAA (10) 22.5 0.0225 E12.5 retina CAGGAGCGGA (4) 3.8 0.0038 E12.5 retina GGGAAGACAC (2) 1.9 0.0019 E14.5 retina TTTGCTTTAA (10) 43.7 0.0437 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina CAGGAGCGGA (4) 5.5 0.0055 E14.5 retina GCAGTGAGTG (5) 3.6 0.0036 E14.5 retina TAATTACAAA (7) 3.6 0.0036 E14.5 retina CGTTAGGGAC (2) 1.8 0.0018 E14.5 retina GGGAAGACAC (2) 1.8 0.0018 E14.5 retina TAATTACACT (2) 1.8 0.0018 E14.5 retina TATCAAAATA (4) 1.8 0.0018 E16.5 retina TTTGCTTTAA (10) 47.1 0.0471 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina CAGGAGCGGA (4) 7.2 0.0072 E16.5 retina GCAGTGAGTG (5) 5.4 0.0054 E16.5 retina CGTTAGGGAC (2) 1.8 0.0018 E16.5 retina TAATTACAAA (7) 1.8 0.0018 E16.5 retina TGGGATTCTA (3) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTTGCTTTAA (10) 41.8 0.0418 E18.5 retina CAGGAGCGGA (4) 7.3 0.0073 E18.5 retina TAATTACAAA (7) 7.3 0.0073 E18.5 retina GTAATTCTAA (3) 3.6 0.0036 E18.5 retina GCAGTGAGTG (5) 1.8 0.0018 E18.5 retina TATCAAAATA (4) 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTTGCTTTAA (10) 15.7 0.0157 P0.5 retina CAGGAGCGGA (4) 11.8 0.0118 P0.5 retina GCAGTGAGTG (5) 3.9 0.0039 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTTGCTTTAA (10) 38.7 0.0387 P2.5 retina CAGGAGCGGA (4) 3.5 0.0035 P2.5 retina GGGTGTGGAA (4) 1.8 0.0018 P2.5 retina GTAATTCTAA (3) 1.8 0.0018 P2.5 retina TAATTACAAA (7) 1.8 0.0018 P2.5 retina TGGGATTCTA (3) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTTGCTTTAA (10) 47.6 0.0476 P4.5 retina GCAGTGAGTG (5) 5.9 0.0059 P4.5 retina CAGGAGCGGA (4) 2 0.002 P4.5 retina CGTTAGGGAC (2) 2 0.002 P4.5 retina TAATTACAAA (7) 2 0.002 P4.5 retina TGGGATTCTA (3) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TTTGCTTTAA (10) 48.4 0.0484 P6.5 retina CAGGAGCGGA (4) 6.7 0.0067 P6.5 retina TATCAAAATA (4) 3.3 0.0033 P10.5 crx- retina TTTGCTTTAA (10) 31.6 0.0316 P10.5 crx- retina CAGGAGCGGA (4) 13 0.013 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TAATTACACT (2) 1.9 0.0019 P10.5 crx+ retina TTTGCTTTAA (10) 28.8 0.0288 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina GCAGTGAGTG (5) 3.8 0.0038 P10.5 crx+ retina CAGGAGCGGA (4) 1.9 0.0019 P10.5 crx+ retina GGGTGTGGAA (4) 1.9 0.0019 P10.5 crx+ retina TAATTACACT (2) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal CAGGAGCGGA (4) 7.4 0.0074 Adult retinal TTTGCTTTAA (10) 7.4 0.0074 Adult retinal CGTTAGGGAC (2) 1.9 0.0019 Adult retinal TAATTACAAA (7) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TTTGCTTTAA (10) 15.3 0.0153 ONL CAGGAGCGGA (4) 1.9 0.0019 ONL GGGTGTGGAA (4) 1.9 0.0019