| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGCTTAGC (2) GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA
| 14.7 | 0.0147 |
| Cb medulloblastoma | AATGCTTAGC (2) ACAATATATC TAATAATAAT (3) TTAATCTTGC
| 13.8 | 0.0138 |
| P8 GC+1d culture | AATGCTTAGC (2) ACAATATATC GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA
| 17.1 | 0.0171 |
| P8 GC+SHH+1d culture | AATGCTTAGC (2) GACTTTATAA (2) TTAATCTTGC
| 9.4 | 0.0094 |
| P1 cortex | AACTCTTGTA (2) AATGCTTAGC (2) GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC
| 27.1 | 0.0271 |
| Hypothalamus | GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC TTTGTTGTGA
| 12.6 | 0.0126 |
| E12.5 retina | GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA
| 9.4 | 0.0094 |
| E14.5 retina | GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC
| 16.3 | 0.0163 |
| E16.5 retina | GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA
| 9 | 0.009 |
| E18.5 retina | GACTTTATAA (2) TAATAATAAT (3)
| 5.4 | 0.0054 |
| P0.5 retina | AACTCTTGTA (2) AATGCTTAGC (2) GACTTTATAA (2)
| 7.9 | 0.0079 |
| P2.5 retina | GACTTTATAA (2)
| 1.8 | 0.0018 |
| P4.5 retina | ACAATATATC GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC
| 11.9 | 0.0119 |
| P6.5 retina | TAATAATAAT (3) TTTGTTGTGA
| 5 | 0.005 |
| P10.5 crx- retina | TAATAATAAT (3) TTAATCTTGC
| 7.5 | 0.0075 |
| P10.5 crx+ retina | GACTTTATAA (2) TTAATCTTGC
| 3.8 | 0.0038 |
| ONL | TAATAATAAT (3)
| 3.8 | 0.0038 |