Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.39704	1810026J23Rik	RIKEN cDNA 1810026J23 gene	9		69773
Human Homolog	LOC90580[hypothetical protein BC011833]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GGCCACCTGG (7) 1.6 0.0016 P8 Cb GC TATTGAAAGT (2) 1.6 0.0016 P8 Cb GC TGAACACTGA (3) 1.6 0.0016 P8 Cb GC TGCCAGCTTG (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TATACTAAAT 4.6 0.0046 Cb medulloblastoma TATTGAAAGT (2) 4.6 0.0046 Cb medulloblastoma TGAACACTGA (3) 4.6 0.0046 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TATTGAAAGT (2) 5.7 0.0057 P8 GC+1d culture TATACTAAAT 4.6 0.0046 P8 GC+1d culture TGAACACTGA (3) 3.4 0.0034 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TGAACACTGA (3) 5.9 0.0059 P8 GC+SHH+1d culture TATTGAAAGT (2) 2.3 0.0023 P8 GC+SHH+1d culture TATACTAAAT 1.2 0.0012 P8 GC+SHH+1d culture TCTTCCCCTG (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TCTTCCCCTG (2) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GGAAGTCCTC (5) 4.5 0.0045 P1 cortex TATACTAAAT 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TATACTAAAT 7.2 0.0072 Hypothalamus TCTTCCCCTG (2) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TATTGAAAGT (2) 7.5 0.0075 E12.5 retina TATACTAAAT 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TATACTAAAT 7.3 0.0073 E14.5 retina TATTGAAAGT (2) 3.6 0.0036 E14.5 retina TCTTCCCCTG (2) 1.8 0.0018 E14.5 retina TGAACACTGA (3) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GGAAGTCCTC (5) 5.4 0.0054 E16.5 retina TATACTAAAT 3.6 0.0036 E16.5 retina TATTGAAAGT (2) 3.6 0.0036 E16.5 retina TAGCTTGTAG (2) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGAACACTGA (3) 9.1 0.0091 E18.5 retina TATACTAAAT 5.5 0.0055 E18.5 retina TGCCAGCTTG (3) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TGAACACTGA (3) 5.9 0.0059 P0.5 retina TATACTAAAT 3.9 0.0039 P0.5 retina GGAAGTCCTC (5) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TATTGAAAGT (2) 10.6 0.0106 P2.5 retina TGAACACTGA (3) 3.5 0.0035 P2.5 retina TATACTAAAT 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TGAACACTGA (3) 5.9 0.0059 P4.5 retina TATACTAAAT 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TATACTAAAT 6.7 0.0067 P6.5 retina TATTGAAAGT (2) 5 0.005 P6.5 retina TAGCTTGTAG (2) 1.7 0.0017 P6.5 retina TGAACACTGA (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TATTGAAAGT (2) 22.3 0.0223 P10.5 crx- retina TGAACACTGA (3) 5.6 0.0056 P10.5 crx- retina TATACTAAAT 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TATTGAAAGT (2) 3.8 0.0038 P10.5 crx+ retina TGAACACTGA (3) 1.9 0.0019 P10.5 crx+ retina TGCCAGCTTG (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TATTGAAAGT (2) 11.1 0.0111 Adult retinal GGAAGTCCTC (5) 3.7 0.0037 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GGCCACCTGG (7) 3.8 0.0038 ONL TAGCTTGTAG (2) 1.9 0.0019 ONL TATACTAAAT 1.9 0.0019 ONL TATTGAAAGT (2) 1.9 0.0019 ONL TGCCAGCTTG (3) 1.9 0.0019