Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3973	Stx8	syntaxin 8	11		55943
Mm.3973	Ntn1	netrin 1	11		18208
Mm.3973	C78197	expressed sequence C78197	11		97702
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TAGGGCCCAC (3) 6.5 0.0065 P8 Cb GC ATAGAACTAA (3) 4.9 0.0049 P8 Cb GC GCAGAAAGCA (10) 4.9 0.0049 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma ATAGAACTAA (3) 9.2 0.0092 Cb medulloblastoma ATGGTGTCAG (5) 9.2 0.0092 Cb medulloblastoma TAGGGCCCAC (3) 6.9 0.0069 Cb medulloblastoma GTGATTTTAT (3) 4.6 0.0046 Cb medulloblastoma ATGTGATTGC (4) 2.3 0.0023 Cb medulloblastoma GCCCCGGACC (3) 2.3 0.0023 Cb medulloblastoma TGTAATTTCC (5) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TAGGGCCCAC (3) 8 0.008 P8 GC+1d culture ATAGAACTAA (3) 6.8 0.0068 P8 GC+1d culture GTGATTTTAT (3) 3.4 0.0034 P8 GC+1d culture AGCACACAGA (6) 2.3 0.0023 P8 GC+1d culture GCAGAAAGCA (10) 2.3 0.0023 P8 GC+1d culture GCCATCTGAG (8) 1.1 0.0011 P8 GC+1d culture TGTAATTTCC (5) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture ATAGAACTAA (3) 7 0.007 P8 GC+SHH+1d culture TAGGGCCCAC (3) 4.7 0.0047 P8 GC+SHH+1d culture TGTAATTTCC (5) 3.5 0.0035 P8 GC+SHH+1d culture GCAGAAAGCA (10) 2.3 0.0023 P8 GC+SHH+1d culture GTGATTTTAT (3) 1.2 0.0012 3T3 fibroblasts TAGGGCCCAC (3) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GTGATTTTAT (3) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus AGCACACAGA (6) 1.8 0.0018 Hypothalamus ATGGTGTCAG (5) 1.8 0.0018 Hypothalamus GCAGAAAGCA (10) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCAGAAAGCA (10) 3.8 0.0038 E12.5 retina AGCACACAGA (6) 1.9 0.0019 E12.5 retina ATGTGATTGC (4) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GCAGAAAGCA (10) 1.8 0.0018 E16.5 retina GCCATCTGAG (8) 1.8 0.0018 E16.5 retina GCCCCGGACC (3) 1.8 0.0018 E16.5 retina TGTAATTTCC (5) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GCAGAAAGCA (10) 3.6 0.0036 E18.5 retina GCCATCTGAG (8) 3.6 0.0036 E18.5 retina ATGTGATTGC (4) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGTAATTTCC (5) 3.9 0.0039 P0.5 retina GCAGAAAGCA (10) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GCAGAAAGCA (10) 5.3 0.0053 P2.5 retina TGTAATTTCC (5) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GCAGAAAGCA (10) 13.9 0.0139 P4.5 retina GTGATTTTAT (3) 4 0.004 P4.5 retina GCCATCTGAG (8) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GCAGAAAGCA (10) 25 0.025 P6.5 retina GCCATCTGAG (8) 1.7 0.0017 P6.5 retina GTGATTTTAT (3) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCAGAAAGCA (10) 13 0.013 P10.5 crx- retina TGTAATTTCC (5) 3.7 0.0037 P10.5 crx- retina ATGTGATTGC (4) 1.9 0.0019 P10.5 crx- retina GTGATTTTAT (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina AGCACACAGA (6) 1.9 0.0019 P10.5 crx+ retina ATGTGATTGC (4) 1.9 0.0019 P10.5 crx+ retina GTGATTTTAT (3) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GCCATCTGAG (8) 1.9 0.0019 Adult retinal GTGATTTTAT (3) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TGTAATTTCC (5) 5.7 0.0057 ONL GCAGAAAGCA (10) 3.8 0.0038 ONL GCCATCTGAG (8) 1.9 0.0019 ONL GCCCCGGACC (3) 1.9 0.0019