Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.39752
2900041A09Rik
RIKEN cDNA 2900041A09 gene
13
72948
Human Homolog
TPPP[brain-specific protein p25 alpha]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACCCTGCT (
6
)
13.1
0.0131
P8 Cb GC
CTGAGACACT
(
2
)
3.3
0.0033
Cb medulloblastoma
AGACCCTGCT (
6
)
2.3
0.0023
Cb medulloblastoma
CTGAGACACT
(
2
)
2.3
0.0023
Cb medulloblastoma
GGTGTTCTGA
(
3
)
2.3
0.0023
P8 GC+1d culture
AGACCCTGCT (
6
)
11.4
0.0114
P8 GC+1d culture
CTGAGACACT
(
2
)
2.3
0.0023
P8 GC+1d culture
GGTGTTCTGA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGACCCTGCT (
6
)
18.7
0.0187
P8 GC+SHH+1d culture
GCTGAGGCTA (
3
)
1.2
0.0012
3T3 fibroblasts
AGACCCTGCT (
6
)
10.5
0.0105
3T3 fibroblasts
CTGAGACACT
(
2
)
10.5
0.0105
E15 cortex
AGACCCTGCT (
6
)
34.6
0.0346
E15 cortex
GGTGTTCTGA
(
3
)
4.9
0.0049
P1 cortex
AGACCCTGCT (
6
)
4.5
0.0045
P1 cortex
CTGAGACACT
(
2
)
4.5
0.0045
Hypothalamus
ACATCAACAT
(
3
)
7.2
0.0072
Hypothalamus
AGACCCTGCT (
6
)
7.2
0.0072
Hypothalamus
GGTGTTCTGA
(
3
)
7.2
0.0072
Hypothalamus
CTGAGACACT
(
2
)
1.8
0.0018
E12.5 retina
AGACCCTGCT (
6
)
7.5
0.0075
E14.5 retina
AGACCCTGCT (
6
)
14.6
0.0146
E16.5 retina
AGACCCTGCT (
6
)
21.7
0.0217
E18.5 retina
AGACCCTGCT (
6
)
16.4
0.0164
E18.5 retina
CTGAGACACT
(
2
)
3.6
0.0036
P0.5 retina
AGACCCTGCT (
6
)
2
0.002
P0.5 retina
CTGAGACACT
(
2
)
2
0.002
P2.5 retina
AGACCCTGCT (
6
)
10.6
0.0106
P4.5 retina
AGACCCTGCT (
6
)
17.8
0.0178
P4.5 retina
CTGAGACACT
(
2
)
2
0.002
P6.5 retina
AGACCCTGCT (
6
)
8.3
0.0083
P6.5 retina
CTGAGACACT
(
2
)
1.7
0.0017
P10.5 crx- retina
AGACCCTGCT (
6
)
9.3
0.0093
P10.5 crx- retina
CTGAGACACT
(
2
)
7.4
0.0074
P10.5 crx+ retina
AGACCCTGCT (
6
)
19.2
0.0192
P10.5 crx+ retina
ACATCAACAT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGTGTTCTGA
(
3
)
1.9
0.0019
Adult retinal
AGACCCTGCT (
6
)
14.8
0.0148
Adult retinal
CTGAGACACT
(
2
)
1.9
0.0019
Adult retinal
GCTGAGGCTA (
3
)
1.9
0.0019
ONL
AGACCCTGCT (
6
)
5.7
0.0057
ONL
CTGAGACACT
(
2
)
3.8
0.0038
