Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3981	Cops6	COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana)	5	5 G2	26893
Gene Ontology	protein binding | signalosome complex
Human Homolog	COPS6[COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACCTGAGTA (2) GTTGAAGGGA TCACAGCTCC 13 0.013 Cb medulloblastoma GACCTGAGTA (2) GCCTACCTCG 18.5 0.0185 P8 GC+1d culture GACCTGAGTA (2) TCACAGCTCC 18.2 0.0182 P8 GC+SHH+1d culture CGCTCCCAGG GACCTGAGTA (2) TCACAGCTCC 23.5 0.0235 3T3 fibroblasts GACCTGAGTA (2) 14 0.014 E15 cortex GACCTGAGTA (2) GCCTACCTCG 9.8 0.0098 P1 cortex GACCTGAGTA (2) 4.5 0.0045 Hypothalamus GACCTGAGTA (2) 25.4 0.0254 E12.5 retina GACCTGAGTA (2) TCACAGCTCC 33.8 0.0338 E14.5 retina GACCTGAGTA (2) 10.9 0.0109 E16.5 retina CGCTCCCAGG GACCTGAGTA (2) 21.7 0.0217 E18.5 retina GACCTGAGTA (2) 34.6 0.0346 P0.5 retina GACCTGAGTA (2) 27.5 0.0275 P2.5 retina GACCTGAGTA (2) 21.1 0.0211 P4.5 retina GACCTGAGTA (2) GTTGAAGGGA 33.7 0.0337 P6.5 retina GACCTGAGTA (2) GTTGAAGGGA 15 0.015 P10.5 crx- retina GACCTGAGTA (2) GTTGAAGGGA TCACAGCTCC 33.5 0.0335 P10.5 crx+ retina GACCTGAGTA (2) 51.9 0.0519 Adult retinal GACCTGAGTA (2) GCCTACCTCG 11.2 0.0112 ONL GACCTGAGTA (2) 9.6 0.0096