Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.40
Cops3
COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)
11
26572
Mm.40
AA414993
expressed sequence AA414993
11
103569
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 23 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCGGTTCCTC
(
2
)
8.2
0.0082
Cb medulloblastoma
CCGGTTCCTC
(
2
)
4.6
0.0046
P8 GC+1d culture
CCGGTTCCTC
(
2
)
GGCTCACAAG
(
2
)
9.1
0.0091
P8 GC+SHH+1d culture
CCGGTTCCTC
(
2
)
4.7
0.0047
3T3 fibroblasts
CCGGTTCCTC
(
2
)
14
0.014
E15 cortex
CCGGTTCCTC
(
2
)
9.9
0.0099
P1 cortex
CCGGTTCCTC
(
2
)
9.1
0.0091
Hypothalamus
CCGGTTCCTC
(
2
)
5.4
0.0054
E12.5 retina
CCGGTTCCTC
(
2
)
7.5
0.0075
E14.5 retina
GGCTCACAAG
(
2
)
1.8
0.0018
E16.5 retina
CCGGTTCCTC
(
2
)
1.8
0.0018
E18.5 retina
CCGGTTCCTC
(
2
)
3.6
0.0036
P0.5 retina
CCGGTTCCTC
(
2
)
2
0.002
P2.5 retina
CCGGTTCCTC
(
2
)
5.3
0.0053
P4.5 retina
CCGGTTCCTC
(
2
)
7.9
0.0079
P6.5 retina
CCGGTTCCTC
(
2
)
GGCTCACAAG
(
2
)
10
0.01
P10.5 crx- retina
CCGGTTCCTC
(
2
)
14.9
0.0149
P10.5 crx+ retina
CCGGTTCCTC
(
2
)
13.5
0.0135
Adult retinal
CCGGTTCCTC
(
2
)
GGCTCACAAG
(
2
)
7.5
0.0075
ONL
CCGGTTCCTC
(
2
)
3.8
0.0038
