Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40035	Pak3	p21 (CDKN1A)-activated kinase 3	X	X F2	18481
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PAK3[p21 (CDKN1A)-activated kinase 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGATTTTGAT (4) 24.5 0.0245 P8 Cb GC TTGTAAAAGG (4) 16.3 0.0163 P8 Cb GC ACTGTGTCTT (4) 3.3 0.0033 P8 Cb GC CAAGTGAAAA (3) 1.6 0.0016 Cb medulloblastoma TTGTAAAAGG (4) 9.2 0.0092 Cb medulloblastoma GGATTTTGAT (4) 4.6 0.0046 Cb medulloblastoma ACTGTGTCTT (4) 2.3 0.0023 Cb medulloblastoma TGGGTTTTGA 2.3 0.0023 Cb medulloblastoma TTCATAAAGG (3) 2.3 0.0023 P8 GC+1d culture TTGTAAAAGG (4) 20.5 0.0205 P8 GC+1d culture GGATTTTGAT (4) 2.3 0.0023 P8 GC+1d culture GGCAGTGGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTGTAAAAGG (4) 31.6 0.0316 P8 GC+SHH+1d culture GGATTTTGAT (4) 4.7 0.0047 P8 GC+SHH+1d culture CAAGTGAAAA (3) 2.3 0.0023 P8 GC+SHH+1d culture GACTCACAAA (5) 1.2 0.0012 E15 cortex GGATTTTGAT (4) 34.6 0.0346 E15 cortex GACTCACAAA (5) 4.9 0.0049 E15 cortex TTGTAAAAGG (4) 4.9 0.0049 P1 cortex GGATTTTGAT (4) 59.1 0.0591 P1 cortex TTGTAAAAGG (4) 22.7 0.0227 P1 cortex AAAAGATTTA (4) 4.5 0.0045 P1 cortex ACTGTGTCTT (4) 4.5 0.0045 P1 cortex CACAATCCAT 4.5 0.0045 Hypothalamus TTGTAAAAGG (4) 16.3 0.0163 Hypothalamus GGATTTTGAT (4) 9.1 0.0091 Hypothalamus TGGGTTTTGA 3.6 0.0036 Hypothalamus ACTGTGTCTT (4) 1.8 0.0018 Hypothalamus GGCAGTGGTT (2) 1.8 0.0018 Hypothalamus TGCACACCTC 1.8 0.0018 E12.5 retina TTGTAAAAGG (4) 18.8 0.0188 E12.5 retina ACTGTGTCTT (4) 1.9 0.0019 E12.5 retina GGCAGTGGTT (2) 1.9 0.0019 E14.5 retina TTGTAAAAGG (4) 18.2 0.0182 E14.5 retina GACTCACAAA (5) 1.8 0.0018 E14.5 retina GGATTTTGAT (4) 1.8 0.0018 E14.5 retina GGCAGTGGTT (2) 1.8 0.0018 E16.5 retina GGATTTTGAT (4) 14.5 0.0145 E16.5 retina GGCAGTGGTT (2) 9.1 0.0091 E16.5 retina TTGTAAAAGG (4) 7.2 0.0072 E16.5 retina AAAAGATTTA (4) 1.8 0.0018 E16.5 retina ACTGTGTCTT (4) 1.8 0.0018 E16.5 retina CACAATCCAT 1.8 0.0018 E16.5 retina TGGGTTTTGA 1.8 0.0018 E18.5 retina TTGTAAAAGG (4) 20 0.02 E18.5 retina GGATTTTGAT (4) 18.2 0.0182 E18.5 retina ACTGTGTCTT (4) 1.8 0.0018 E18.5 retina CAAGTGAAAA (3) 1.8 0.0018 E18.5 retina CACAATCCAT 1.8 0.0018 E18.5 retina TGCACACCTC 1.8 0.0018 P0.5 retina GGATTTTGAT (4) 19.6 0.0196 P0.5 retina TTGTAAAAGG (4) 13.7 0.0137 P0.5 retina ACTGTGTCTT (4) 2 0.002 P0.5 retina TTCATAAAGG (3) 2 0.002 P2.5 retina GGATTTTGAT (4) 58.1 0.0581 P2.5 retina TTGTAAAAGG (4) 15.8 0.0158 P2.5 retina GGCAGTGGTT (2) 8.8 0.0088 P2.5 retina ACTGTGTCTT (4) 3.5 0.0035 P2.5 retina AAAAGATTTA (4) 1.8 0.0018 P2.5 retina GCCATTGAAA 1.8 0.0018 P4.5 retina GGATTTTGAT (4) 89.2 0.0892 P4.5 retina TTGTAAAAGG (4) 35.7 0.0357 P4.5 retina ACTGTGTCTT (4) 9.9 0.0099 P4.5 retina CACAATCCAT 2 0.002 P6.5 retina GGATTTTGAT (4) 20 0.02 P6.5 retina ACTGTGTCTT (4) 6.7 0.0067 P6.5 retina CACAATCCAT 6.7 0.0067 P6.5 retina TTGTAAAAGG (4) 5 0.005 P6.5 retina TTCATAAAGG (3) 3.3 0.0033 P6.5 retina GCCATTGAAA 1.7 0.0017 P6.5 retina GGCAGTGGTT (2) 1.7 0.0017 P10.5 crx- retina GGATTTTGAT (4) 46.4 0.0464 P10.5 crx- retina ACTGTGTCTT (4) 22.3 0.0223 P10.5 crx- retina TTGTAAAAGG (4) 22.3 0.0223 P10.5 crx- retina GGCAGTGGTT (2) 5.6 0.0056 P10.5 crx+ retina TTGTAAAAGG (4) 11.5 0.0115 P10.5 crx+ retina ACTGTGTCTT (4) 9.6 0.0096 P10.5 crx+ retina GGATTTTGAT (4) 3.8 0.0038 P10.5 crx+ retina CAAGTGAAAA (3) 1.9 0.0019 P10.5 crx+ retina TGCACACCTC 1.9 0.0019 Adult retinal TTGTAAAAGG (4) 7.4 0.0074 Adult retinal GCCATTGAAA 5.6 0.0056 Adult retinal GGCAGTGGTT (2) 3.7 0.0037 Adult retinal AAAAGATTTA (4) 1.9 0.0019 Adult retinal ACTGTGTCTT (4) 1.9 0.0019 Adult retinal CAAGTGAAAA (3) 1.9 0.0019 ONL TTGTAAAAGG (4) 9.6 0.0096 ONL ACTGTGTCTT (4) 1.9 0.0019