Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40120	4121402D02Rik	RIKEN cDNA 4121402D02 gene	11		74026
Mm.40120	Casc3	cancer susceptibility candidate 3	11		192160
Gene Ontology	cytoplasm | mRNA localization, intracellular | mRNA processing | mRNA-nucleus export | nucleus | protein binding | protein self binding | ribonucleoprotein complex | transport
Human Homolog	CASC3[cancer susceptibility candidate 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAGCAGGAC (3) 11.4 0.0114 P8 Cb GC TGTGTTGTTT (2) 9.8 0.0098 Cb medulloblastoma GGAGCAGGAC (3) 48.6 0.0486 Cb medulloblastoma TGTGTTGTTT (2) 4.6 0.0046 P8 GC+1d culture GGAGCAGGAC (3) 10.3 0.0103 P8 GC+1d culture TGTGTTGTTT (2) 4.6 0.0046 P8 GC+SHH+1d culture TGTGTTGTTT (2) 10.5 0.0105 P8 GC+SHH+1d culture GGAGCAGGAC (3) 5.9 0.0059 P8 GC+SHH+1d culture GAGAAGTACT (2) 1.2 0.0012 E15 cortex GGAGCAGGAC (3) 9.9 0.0099 E15 cortex TGTGTTGTTT (2) 4.9 0.0049 P1 cortex TGTGTTGTTT (2) 9.1 0.0091 P1 cortex GGAGCAGGAC (3) 4.5 0.0045 Hypothalamus GGAGCAGGAC (3) 34.4 0.0344 Hypothalamus TGTGTTGTTT (2) 5.4 0.0054 Hypothalamus GAGAAGTACT (2) 1.8 0.0018 E12.5 retina GGAGCAGGAC (3) 3.8 0.0038 E12.5 retina TGTGTTGTTT (2) 3.8 0.0038 E14.5 retina GGAGCAGGAC (3) 3.6 0.0036 E14.5 retina TGTGTTGTTT (2) 3.6 0.0036 E14.5 retina GAGAAGTACT (2) 1.8 0.0018 E16.5 retina GGAGCAGGAC (3) 3.6 0.0036 E16.5 retina TGTGTTGTTT (2) 3.6 0.0036 E18.5 retina GGAGCAGGAC (3) 5.5 0.0055 E18.5 retina TGTGTTGTTT (2) 3.6 0.0036 P0.5 retina GGAGCAGGAC (3) 11.8 0.0118 P0.5 retina TGTGTTGTTT (2) 5.9 0.0059 P2.5 retina GGAGCAGGAC (3) 19.4 0.0194 P2.5 retina TGTGTTGTTT (2) 8.8 0.0088 P4.5 retina TGTGTTGTTT (2) 11.9 0.0119 P4.5 retina GGAGCAGGAC (3) 9.9 0.0099 P6.5 retina GGAGCAGGAC (3) 31.7 0.0317 P6.5 retina TGTGTTGTTT (2) 13.3 0.0133 P10.5 crx- retina GGAGCAGGAC (3) 35.3 0.0353 P10.5 crx- retina TGTGTTGTTT (2) 9.3 0.0093 P10.5 crx+ retina GGAGCAGGAC (3) 17.3 0.0173 P10.5 crx+ retina TGTGTTGTTT (2) 5.8 0.0058 Adult retinal GGAGCAGGAC (3) 5.6 0.0056 ONL GGAGCAGGAC (3) 7.7 0.0077 ONL TGTGTTGTTT (2) 1.9 0.0019