Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.40424 Kcna1potassium voltage-gated channel, shaker-related subfamily, member 1 6  6 61.0 cM  16485 
 Gene Ontology cation channel activity | cation transport | integral to membrane | integral to plasma membrane | ion channel activity | ion transport | membrane | potassium channel activity | potassium ion transport | transport | voltage-gated ion channel activity | voltage-gated potassium channel activity | voltage-gated potassium channel complex
 Human Homolog KCNA1[potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGAAAAAAAAA (204)45.70.0457
P8 Cb GCTAGCGCGCCC (35)1.60.0016
Cb medulloblastomaGAAAAAAAAA (204)173.40.1734
Cb medulloblastomaATCTGTTCAT9.20.0092
Cb medulloblastomaGAGATCGAAG4.60.0046
Cb medulloblastomaTAGGGCCCTA (2)4.60.0046
P8 GC+1d cultureGAAAAAAAAA (204)41.10.0411
P8 GC+1d cultureATCTGTTCAT2.30.0023
P8 GC+1d cultureTAGCGCGCCC (35)1.10.0011
P8 GC+SHH+1d cultureGAAAAAAAAA (204)77.30.0773
P8 GC+SHH+1d cultureATCTGTTCAT3.50.0035
3T3 fibroblastsGACCCTTGGG (3)70.007
3T3 fibroblastsTAGCGCGCCC (35)3.50.0035
E15 cortexGAAAAAAAAA (204)54.40.0544
E15 cortexGACCCTTGGG (3)9.90.0099
E15 cortexTAGGGCCCTA (2)4.90.0049
P1 cortexGAAAAAAAAA (204)45.50.0455
HypothalamusGAAAAAAAAA (204)670.067
HypothalamusGACCCTTGGG (3)1.80.0018
HypothalamusGAGATCGAAG1.80.0018
E12.5 retinaGAAAAAAAAA (204)46.90.0469
E12.5 retinaGACCCTTGGG (3)3.80.0038
E14.5 retinaGAAAAAAAAA (204)34.60.0346
E16.5 retinaGAAAAAAAAA (204)23.50.0235
E16.5 retinaGACCCTTGGG (3)1.80.0018
E18.5 retinaGAAAAAAAAA (204)65.50.0655
P0.5 retinaGAAAAAAAAA (204)35.30.0353
P0.5 retinaGACCCTTGGG (3)5.90.0059
P2.5 retinaGAAAAAAAAA (204)86.20.0862
P2.5 retinaAAGTGACAGA (2)1.80.0018
P2.5 retinaGACCCTTGGG (3)1.80.0018
P2.5 retinaGGTTTCATTT (2)1.80.0018
P4.5 retinaGAAAAAAAAA (204)51.50.0515
P4.5 retinaGACCCTTGGG (3)5.90.0059
P6.5 retinaGAAAAAAAAA (204)400.04
P6.5 retinaGACCCTTGGG (3)1.70.0017
P6.5 retinaGGTTTCATTT (2)1.70.0017
P10.5 crx- retinaGAAAAAAAAA (204)16.70.0167
P10.5 crx- retinaATCTGTTCAT3.70.0037
P10.5 crx+ retinaGAAAAAAAAA (204)42.30.0423
P10.5 crx+ retinaAAGTGACAGA (2)1.90.0019
P10.5 crx+ retinaGACCCTTGGG (3)1.90.0019
Adult retinalGAAAAAAAAA (204)16.70.0167
Adult retinalATCTGTTCAT3.70.0037
Adult retinalAAGTGACAGA (2)1.90.0019
Adult retinalGACCCTTGGG (3)1.90.0019
Adult retinalGGTTTCATTT (2)1.90.0019
ONLGAAAAAAAAA (204)24.90.0249