Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.40491
D10Bwg1379e
DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed
10
10 8.0 cM
215821
Mm.40491
B930094H20Rik
RIKEN cDNA B930094H20 gene
10
403354
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
AAGACAAAAT
(
3
)
1.6
0.0016
Cb medulloblastoma
AAAACTACAT
(
4
)
4.6
0.0046
Cb medulloblastoma
AAGACAAAAT
(
3
)
2.3
0.0023
Cb medulloblastoma
CCAAAAGACT
(
4
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
CATCAGCCAG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CCAAAAGACT
(
4
)
1.2
0.0012
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
AAGACAAAAT
(
3
)
9.1
0.0091
P1 cortex
CCAAAAGACT
(
4
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
CCAAAAGACT
(
4
)
3.6
0.0036
Hypothalamus
AAGACAAAAT
(
3
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
AAGACAAAAT
(
3
)
1.9
0.0019
E12.5 retina
CATCAGCCAG
(
3
)
1.9
0.0019
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
TGTAATTTGT (
4
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
CATCAGCCAG
(
3
)
1.8
0.0018
E18.5 retina
TGTAATTTGT (
4
)
1.8
0.0018
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
AAGACAAAAT
(
3
)
2
0.002
P0.5 retina
TGTAATTTGT (
4
)
2
0.002
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P10.5 crx- retina
CATCAGCCAG
(
3
)
1.9
0.0019
P10.5 crx- retina
CCAAAAGACT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
AAAACTACAT
(
4
)
1.9
0.0019
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
