Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40577	A330078L11Rik	RIKEN cDNA A330078L11 gene	3		320008
Mm.40577	1700037N05Rik	RIKEN cDNA 1700037N05 gene	3		73264
Mm.40577	Ppm1l	protein phosphatase 1 (formerly 2C)-like	3		242083
Gene Ontology	hydrolase activity | magnesium ion binding | MAPKKK cascade | protein binding | protein phosphatase type 2C activity | transmembrane receptor protein serine/threonine kinase signaling pathway
Human Homolog	PPM1L[protein phosphatase 1 (formerly 2C)-like]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 19 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCACCACCTT (4) 3.3 0.0033 Cb medulloblastoma CAATCACTAA (3) TCTCGATCCC (5) 6.9 0.0069 P8 GC+1d culture CAATCACTAA (3) TCTCGATCCC (5) TTAGACAGAA (3) 3.3 0.0033 P8 GC+SHH+1d culture CAATCACTAA (3) TTAGACAGAA (3) 5.9 0.0059 3T3 fibroblasts TCTCGATCCC (5) 3.5 0.0035 E15 cortex GCACCACCTT (4) 4.9 0.0049 P1 cortex GCACCACCTT (4) 4.5 0.0045 Hypothalamus CAATCACTAA (3) 1.8 0.0018 E14.5 retina TTAGACAGAA (3) 1.8 0.0018 E18.5 retina CAATCACTAA (3) 3.6 0.0036 P0.5 retina GCACCACCTT (4) 2 0.002 P2.5 retina CAATCACTAA (3) GCACCACCTT (4) 3.6 0.0036 P6.5 retina CAATCACTAA (3) GCACCACCTT (4) 6.6 0.0066