Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.4079
BC026744
cDNA sequence BC026744
5
5 F
330192
Human Homolog
FLJ12750[hypothetical protein FLJ12750]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAGCTCCGG
(
2
)
GTTCAAAGCC
21.2
0.0212
Cb medulloblastoma
GGAGCTCCGG
(
2
)
6.9
0.0069
P8 GC+1d culture
CAACACGTTG
GGAGCTCCGG
(
2
)
26.3
0.0263
P8 GC+SHH+1d culture
GGAGCTCCGG
(
2
)
GTTCAAAGCC
19.9
0.0199
3T3 fibroblasts
GGAGCTCCGG
(
2
)
7
0.007
E15 cortex
GGAGCTCCGG
(
2
)
GTTCAAAGCC
19.7
0.0197
P1 cortex
GCAGAGAAGT
(
2
)
4.5
0.0045
E12.5 retina
GGAGCTCCGG
(
2
)
16.9
0.0169
E14.5 retina
GCAGAGAAGT
(
2
)
GGAGCTCCGG
(
2
)
3.6
0.0036
E16.5 retina
CAACACGTTG
CTTATTAAAT (
2
)
GTTCAAAGCC
5.4
0.0054
E18.5 retina
CTTATTAAAT (
2
)
GGAGCTCCGG
(
2
)
9.1
0.0091
P0.5 retina
CAACACGTTG
CTTATTAAAT (
2
)
GGAGCTCCGG
(
2
)
19.7
0.0197
P2.5 retina
CAACACGTTG
GGAGCTCCGG
(
2
)
24.6
0.0246
P4.5 retina
GGAGCTCCGG
(
2
)
25.8
0.0258
P6.5 retina
CAACACGTTG
GGAGCTCCGG
(
2
)
20
0.02
P10.5 crx- retina
GGAGCTCCGG
(
2
)
13
0.013
P10.5 crx+ retina
GGAGCTCCGG
(
2
)
15.4
0.0154
Adult retinal
CAACACGTTG
GGAGCTCCGG
(
2
)
13
0.013
ONL
CAACACGTTG
CTTATTAAAT (
2
)
GCAGAGAAGT
(
2
)
GGAGCTCCGG
(
2
)
9.5
0.0095
