Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41044	Slc4a4	solute carrier family 4 (anion exchanger), member 4	5		54403
Gene Ontology	anion transport | bicarbonate transport | inorganic anion exchanger activity | integral to membrane | integral to plasma membrane | membrane | regulation of pH | sodium ion transport | sodium:bicarbonate symporter activity
Human Homolog	SLC4A4[solute carrier family 4, sodium bicarbonate cotransporter, member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTGGCTG AAGCTCAGTT CGTGCACGTG GTGGAACAAA TATGTGTGTG TGTGTAAAAA (3) TTGATCTACT (2) TTTTTGTTTC (2) 37.4 0.0374 Cb medulloblastoma AACTTGGCTG AAGCTCAGTT CGTGCACGTG GTGGAACAAA TAACAACAAC (2) TGTGTAAAAA (3) TTGATCTACT (2) 43.8 0.0438 P8 GC+1d culture AACTTGGCTG AAGCTCAGTT CGTGCACGTG GTGGAACAAA TAACAACAAC (2) TATGTGTGTG TTTTTGTTTC (2) 39.9 0.0399 P8 GC+SHH+1d culture AACTTGGCTG AAGCTCAGTT CGTGCACGTG TAACAACAAC (2) TATGTGTGTG TGTGTAAAAA (3) 24.6 0.0246 3T3 fibroblasts AACTTGGCTG AAGCTCAGTT CGTGCACGTG TATGTGTGTG 21 0.021 E15 cortex AAGCTCAGTT CGTGCACGTG 69.2 0.0692 P1 cortex AAGCTCAGTT CGTGCACGTG GTGACTGTGA TATGTGTGTG TTTTTGTTTC (2) 40.8 0.0408 Hypothalamus AACTTGGCTG AAGCTCAGTT CGTGCACGTG GTGGAACAAA TAACAACAAC (2) TGTCTTGTCC TTTTTGTTTC (2) 32.5 0.0325 E12.5 retina CGTGCACGTG TATGTGTGTG 5.7 0.0057 E14.5 retina AACTTGGCTG AAGCTCAGTT CGTGCACGTG 20 0.02 E16.5 retina AACTTGGCTG AAGCTCAGTT CGTGCACGTG GTGACTGTGA 28.9 0.0289 E18.5 retina AACTTGGCTG AAGCTCAGTT CGTGCACGTG 10.9 0.0109 P0.5 retina AACTTGGCTG AAGCTCAGTT CGTGCACGTG TATGTGTGTG TGTCTTGTCC 29.4 0.0294 P2.5 retina AAGCTCAGTT CGTGCACGTG GTGACTGTGA TATGTGTGTG TGTGTAAAAA (3) 10.7 0.0107 P4.5 retina AAGCTCAGTT CGTGCACGTG 13.8 0.0138 P6.5 retina AACTTGGCTG AAGCTCAGTT CGTGCACGTG 20 0.02 P10.5 crx- retina AACTTGGCTG AAGCTCAGTT CGTGCACGTG TATGTGTGTG 37.2 0.0372 P10.5 crx+ retina AAGCTCAGTT CGTGCACGTG TATGTGTGTG TGTCTTGTCC 13.4 0.0134 Adult retinal AACTTGGCTG AAGCTCAGTT CGTGCACGTG GTGGAACAAA TATGTGTGTG 15 0.015 ONL AACTTGGCTG CGTGCACGTG 5.7 0.0057