Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41108
AF322649
cDNA sequence AF322649
7
210146
Human Homolog
LOC126298[similar to FKSG27]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGGAGCTGT
CCTGTAATCC (
2
)
13
0.013
Cb medulloblastoma
CCTGTAATCC (
2
)
CCTGTATTCC (
3
)
13.9
0.0139
P8 GC+1d culture
AAGGAGCTGT
CCTGTAATCC (
2
)
5.7
0.0057
P8 GC+SHH+1d culture
AAGGAGCTGT
CCTGTAATCC (
2
)
11.7
0.0117
3T3 fibroblasts
CCTGTAATCC (
2
)
TGCCAGTGAC
14
0.014
E15 cortex
CCTGTAATCC (
2
)
TGCCAGTGAC
9.8
0.0098
P1 cortex
CCTGTAATCC (
2
)
CCTGTATTCC (
3
)
TGCCAGTGAC
36.3
0.0363
Hypothalamus
AAGGAGCTGT
CCTGTAATCC (
2
)
CCTGTATTCC (
3
)
9
0.009
E12.5 retina
CCTGTAATCC (
2
)
3.8
0.0038
E14.5 retina
AAGGAGCTGT
CCTGTAATCC (
2
)
CCTGTATTCC (
3
)
10.9
0.0109
E16.5 retina
CCTGTAATCC (
2
)
3.6
0.0036
E18.5 retina
AAGGAGCTGT
CCTGTAATCC (
2
)
9.1
0.0091
P0.5 retina
AAGGAGCTGT
CCTGTAATCC (
2
)
5.9
0.0059
P2.5 retina
AAGGAGCTGT
CCTGTAATCC (
2
)
8.8
0.0088
P4.5 retina
AAGGAGCTGT
CCTGTAATCC (
2
)
11.8
0.0118
P6.5 retina
CCTGTAATCC (
2
)
CCTGTATTCC (
3
)
3.4
0.0034
P10.5 crx- retina
AAGGAGCTGT
CCTGTAATCC (
2
)
CCTGTATTCC (
3
)
7.5
0.0075
P10.5 crx+ retina
AAGGAGCTGT
CCTGTAATCC (
2
)
5.7
0.0057
Adult retinal
AAGACGGGTA
AAGGAGCTGT
CCTGTAATCC (
2
)
13
0.013
ONL
AAGGAGCTGT
CCTGTAATCC (
2
)
9.5
0.0095
