Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41396
2200002K05Rik
RIKEN cDNA 2200002K05 gene
9
69137
Gene Ontology
integral to membrane
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
2
)
27.7
0.0277
Cb medulloblastoma
TGTGTGTGTG (
2
)
30.1
0.0301
P8 GC+1d culture
TGTGTGTGTG (
2
)
27.4
0.0274
P8 GC+SHH+1d culture
TGTGTGTGTG (
2
)
28.1
0.0281
3T3 fibroblasts
CACACAGTGC (
4
)
TGTGTGTGTG (
2
)
31.5
0.0315
P1 cortex
TGTGTGTGTG (
2
)
18.2
0.0182
Hypothalamus
TGAAAAATAA
TGTGTGTGTG (
2
)
29
0.029
E12.5 retina
TGTGTGTGTG (
2
)
43.2
0.0432
E14.5 retina
TGTGTGTGTG (
2
)
54.7
0.0547
E16.5 retina
TGAAAAATAA
TGTGTGTGTG (
2
)
41.6
0.0416
E18.5 retina
CACACAGTGC (
4
)
TGTGTGTGTG (
2
)
49.1
0.0491
P0.5 retina
TGTGTGTGTG (
2
)
21.6
0.0216
P2.5 retina
TGTGTGTGTG (
2
)
35.2
0.0352
P4.5 retina
TGTGTGTGTG (
2
)
47.6
0.0476
P6.5 retina
TGTGTGTGTG (
2
)
41.7
0.0417
P10.5 crx- retina
TGTGTGTGTG (
2
)
59.4
0.0594
P10.5 crx+ retina
CACACAGTGC (
4
)
TGTGTGTGTG (
2
)
46.1
0.0461
Adult retinal
TGTGTGTGTG (
2
)
53.7
0.0537
ONL
TGAAAAATAA
TGTGTGTGTG (
2
)
26.8
0.0268
