Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4141	Vldlr	very low density lipoprotein receptor	19	19 20.0 cM	22359
Gene Ontology	calcium ion binding | cholesterol metabolism | coated pit | endocytosis | extracellular space | integral to membrane | lipid transport | lipid transporter activity | membrane | receptor activity
Human Homolog	VLDLR[very low density lipoprotein receptor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma TTGGAACACA 11.6 0.0116 P8 GC+1d culture GATCCTGCAG (2) 1.1 0.0011 3T3 fibroblasts AACTTTGACA (4) 3.5 0.0035 E15 cortex GATCCTGCAG (2) 4.9 0.0049 P1 cortex GATCCTGCAG (2) 4.5 0.0045 Hypothalamus TTGGAACACA 3.6 0.0036 E14.5 retina AACTTTGACA (4) 1.8 0.0018 E14.5 retina TTGGAACACA 1.8 0.0018 E14.5 retina TTGGCCATCA (2) 1.8 0.0018 E16.5 retina TTGGAACACA 5.4 0.0054 E16.5 retina AACTTTGACA (4) 1.8 0.0018 E16.5 retina GATCCTGCAG (2) 1.8 0.0018 E18.5 retina TAGGTACAGG 5.5 0.0055 E18.5 retina TTGGAACACA 5.5 0.0055 P0.5 retina TTGGCCATCA (2) 3.9 0.0039 P0.5 retina AACTTTGACA (4) 2 0.002 P2.5 retina GATCCTGCAG (2) 1.8 0.0018 P2.5 retina TTGGAACACA 1.8 0.0018 P4.5 retina TTGGAACACA 4 0.004 P4.5 retina TAGGTACAGG 2 0.002 P6.5 retina TAGGTACAGG 1.7 0.0017 P6.5 retina TTGGAACACA 1.7 0.0017 P10.5 crx- retina AACTTTGACA (4) 1.9 0.0019 P10.5 crx- retina TTGGAACACA 1.9 0.0019 P10.5 crx- retina TTGGCCATCA (2) 1.9 0.0019 P10.5 crx+ retina TTGGAACACA 9.6 0.0096 Adult retinal TTGGAACACA 9.3 0.0093 Adult retinal AACTTTGACA (4) 3.7 0.0037 Adult retinal GATCCTGCAG (2) 1.9 0.0019 ONL TTGGAACACA 3.8 0.0038 ONL AACTTTGACA (4) 1.9 0.0019 ONL GATCCTGCAG (2) 1.9 0.0019