Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41433	Dffa	DNA fragmentation factor, alpha subunit	4		13347
Gene Ontology	apoptosis | intracellular | protein binding
Human Homolog	DFFA[DNA fragmentation factor, 45kDa, alpha polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTGACCTGC (2) GCTTTTATTT (3) GTTGATCATC TGGGTGCTGG (2) TTGATTTGCT 14.6 0.0146 Cb medulloblastoma GTTGATCATC TACCATCAAG (2) TGGGTGCTGG (2) 16.1 0.0161 P8 GC+1d culture GCTTTTATTT (3) GTTGATCATC TACCATCAAG (2) TCTTTAATCC (2) TGACTTACAC TGGGTGCTGG (2) 14.7 0.0147 P8 GC+SHH+1d culture GCTTTTATTT (3) GTTGATCATC TCTTTAATCC (2) TGCAACATCT TGGGTGCTGG (2) TTGATTTGCT 14.1 0.0141 3T3 fibroblasts TACCATCAAG (2) TCTTTAATCC (2) TGGGTGCTGG (2) 28 0.028 E15 cortex TCTTTAATCC (2) TGGGTGCTGG (2) 19.7 0.0197 P1 cortex GCTTTTATTT (3) TCTTTAATCC (2) TGGGTGCTGG (2) 31.8 0.0318 Hypothalamus GTTGATCATC TACCATCAAG (2) TGGGTGCTGG (2) TTGATTTGCT 16.3 0.0163 E12.5 retina GCTTTTATTT (3) GTTGATCATC TACCATCAAG (2) TGGGTGCTGG (2) 17 0.017 E14.5 retina GTTGATCATC TCTTTAATCC (2) TGGGTGCTGG (2) 78.4 0.0784 E16.5 retina ATTGACCTGC (2) TCTTTAATCC (2) TGGGTGCTGG (2) 52.6 0.0526 E18.5 retina GCTTTTATTT (3) GTTGATCATC TCTTTAATCC (2) TGGGTGCTGG (2) TTGATTTGCT 27.2 0.0272 P0.5 retina GTTGATCAAA TCTTTAATCC (2) TGACTTACAC TGGGTGCTGG (2) 19.7 0.0197 P2.5 retina TCTTTAATCC (2) TGGGTGCTGG (2) 19.4 0.0194 P4.5 retina ATTGACCTGC (2) GTTGATCAAA TACCATCAAG (2) TCTTTAATCC (2) TGGGTGCTGG (2) 25.8 0.0258 P6.5 retina GCTTTTATTT (3) GTTGATCATC TGACTTACAC TGGGTGCTGG (2) 18.4 0.0184 P10.5 crx- retina GCTTTTATTT (3) TCTTTAATCC (2) TGCAACATCT TGGGTGCTGG (2) 29.7 0.0297 P10.5 crx+ retina GCTTTTATTT (3) TACCATCAAG (2) TCTTTAATCC (2) TGGGTGCTGG (2) 21.1 0.0211 Adult retinal TACCATCAAG (2) TCTTTAATCC (2) TGCAACATCT TGGGTGCTGG (2) 24.2 0.0242 ONL GTTGATCAAA TCTTTAATCC (2) TGGGTGCTGG (2) 57.4 0.0574