Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4146	Pdgfrb	platelet derived growth factor receptor, beta polypeptide	18	18 30.0 cM	18596
Gene Ontology	ATP binding | extracellular space | integral to membrane | kinase activity | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | regulation of peptidyl-tyrosine phosphorylation | signal transducer activity | signal transduction | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway | vascular endothelial growth factor receptor activity
Human Homolog	PDGFRB[platelet-derived growth factor receptor, beta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGGGAACA (5) 6.5 0.0065 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC CTGCAGAACT (4) 3.3 0.0033 Cb medulloblastoma GCTGGGAACA (5) 6.9 0.0069 Cb medulloblastoma CTGCAGAACT (4) 2.3 0.0023 Cb medulloblastoma GCGATGAGCA (2) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GCTGGGAACA (5) 5.7 0.0057 P8 GC+1d culture CAGGACAAGA 2.3 0.0023 P8 GC+1d culture GGGCTTCCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture GCTGGGAACA (5) 9.4 0.0094 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GCGATGAGCA (2) 3.5 0.0035 3T3 fibroblasts CAGGACAAGA 17.5 0.0175 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GGGCTTCCAG (4) 9.1 0.0091 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GCTGGGAACA (5) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GCTGGGAACA (5) 3.8 0.0038 E12.5 retina GCGATGAGCA (2) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GCGATGAGCA (2) 3.6 0.0036 E14.5 retina CAGGACAAGA 1.8 0.0018 E14.5 retina CTGCAGAACT (4) 1.8 0.0018 E14.5 retina GCTGGGAACA (5) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GCGATGAGCA (2) 3.6 0.0036 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GCTGGGAACA (5) 3.6 0.0036 P0.5 retina GCTGGGAACA (5) 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTGCAGAACT (4) 2 0.002 P2.5 retina GCTGGGAACA (5) 10.6 0.0106 P2.5 retina TTTTTTTTTT (433) 7 0.007 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GCTGGGAACA (5) 5.9 0.0059 P4.5 retina GCGATGAGCA (2) 2 0.002 P4.5 retina GGGCTTCCAG (4) 2 0.002 P6.5 retina GCTGGGAACA (5) 10 0.01 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTGCAGAACT (4) 1.7 0.0017 P6.5 retina GGGCTTCCAG (4) 1.7 0.0017 P10.5 crx- retina CAGGACAAGA 3.7 0.0037 P10.5 crx- retina GCGATGAGCA (2) 1.9 0.0019 P10.5 crx+ retina GCTGGGAACA (5) 5.8 0.0058 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GCTGGGAACA (5) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GCTGGGAACA (5) 1.9 0.0019