Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41522
Zfhx4
zinc finger homeodomain 4
3
3 A1
80892
Gene Ontology
DNA binding
|
nucleus
Human Homolog
ZFHX4[zinc finger homeodomain 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTCTCTTA (
3
)
8.2
0.0082
P8 Cb GC
AAGTCCTGGC (
6
)
1.6
0.0016
P8 Cb GC
GAACAGAACG
(
3
)
1.6
0.0016
Cb medulloblastoma
AAGTCCTGGC (
6
)
9.2
0.0092
Cb medulloblastoma
GTTTCGAAAA
(
3
)
4.6
0.0046
Cb medulloblastoma
TGGTCTCTTA (
3
)
2.3
0.0023
P8 GC+1d culture
TGGTCTCTTA (
3
)
9.1
0.0091
P8 GC+1d culture
AAGTCCTGGC (
6
)
1.1
0.0011
P8 GC+1d culture
GAACAGAACG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTCTCTTA (
3
)
12.9
0.0129
P8 GC+SHH+1d culture
AAGTCCTGGC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GAACAGAACG
(
3
)
1.2
0.0012
3T3 fibroblasts
AAGTCCTGGC (
6
)
3.5
0.0035
E15 cortex
TGGTCTCTTA (
3
)
4.9
0.0049
P1 cortex
TGGTCTCTTA (
3
)
9.1
0.0091
Hypothalamus
AAGTCCTGGC (
6
)
3.6
0.0036
E12.5 retina
TGGTCTCTTA (
3
)
9.4
0.0094
E14.5 retina
GAACAGAACG
(
3
)
1.8
0.0018
E14.5 retina
TGGTCTCTTA (
3
)
1.8
0.0018
E16.5 retina
TGGTCTCTTA (
3
)
3.6
0.0036
E18.5 retina
TGGTCTCTTA (
3
)
3.6
0.0036
E18.5 retina
GAACAGAACG
(
3
)
1.8
0.0018
P0.5 retina
TGGTCTCTTA (
3
)
5.9
0.0059
P0.5 retina
AAGTCCTGGC (
6
)
2
0.002
P0.5 retina
GAACAGAACG
(
3
)
2
0.002
P2.5 retina
TGGTCTCTTA (
3
)
14.1
0.0141
P2.5 retina
GAACAGAACG
(
3
)
1.8
0.0018
P4.5 retina
TGGTCTCTTA (
3
)
9.9
0.0099
P4.5 retina
AAGTCCTGGC (
6
)
2
0.002
P6.5 retina
TGGTCTCTTA (
3
)
10
0.01
P10.5 crx- retina
AAGTCCTGGC (
6
)
3.7
0.0037
P10.5 crx- retina
GTTTCGAAAA
(
3
)
3.7
0.0037
P10.5 crx+ retina
TGGTCTCTTA (
3
)
5.8
0.0058
P10.5 crx+ retina
AAGTCCTGGC (
6
)
1.9
0.0019
P10.5 crx+ retina
GAACAGAACG
(
3
)
1.9
0.0019
Adult retinal
TGGTCTCTTA (
3
)
1.9
0.0019
ONL
TGGTCTCTTA (
3
)
11.5
0.0115
ONL
GAACAGAACG
(
3
)
1.9
0.0019
