Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41557	Scrn1	secernin 1	6		69938
Gene Ontology	dipeptidase activity | exocytosis | proteolysis and peptidolysis
Human Homolog	SCRN1[secernin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 135 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TGGCCCAAAA (8) 8.2 0.0082 P8 Cb GC GACGAGATTC (2) 4.9 0.0049 P8 Cb GC TGGGAAAAAA (8) 4.9 0.0049 P8 Cb GC CAGAAAATAG (2) 3.3 0.0033 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 P8 Cb GC AATTTTAAAA (3) 1.6 0.0016 P8 Cb GC GAAGTCAAAA (3) 1.6 0.0016 P8 Cb GC GAAGTCAATA (2) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma GAAGTCAAAA (3) 37 0.037 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 Cb medulloblastoma GAAGTCAATA (2) 4.6 0.0046 Cb medulloblastoma GACGAGATTC (2) 4.6 0.0046 Cb medulloblastoma TGGGAAAAAA (8) 4.6 0.0046 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture GAAGTCAAAA (3) 11.4 0.0114 P8 GC+1d culture TGGGAAAAAA (8) 6.8 0.0068 P8 GC+1d culture GAAGTCAATA (2) 4.6 0.0046 P8 GC+1d culture TGGCCCAAAA (8) 4.6 0.0046 P8 GC+1d culture GACGAGATTC (2) 3.4 0.0034 P8 GC+1d culture GCCTCCAGGG (6) 2.3 0.0023 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture AATTTTAAAA (3) 1.1 0.0011 P8 GC+1d culture CAGAAAATAG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture GAAGTCAAAA (3) 10.5 0.0105 P8 GC+SHH+1d culture GAAGTCAATA (2) 5.9 0.0059 P8 GC+SHH+1d culture GACGAGATTC (2) 4.7 0.0047 P8 GC+SHH+1d culture TGGCCCAAAA (8) 4.7 0.0047 P8 GC+SHH+1d culture TGGGAAAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture AATTTTAAAA (3) 1.2 0.0012 3T3 fibroblasts GCCTCCAGGG (6) 7 0.007 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts TGGCCCAAAA (8) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex GACGAGATTC (2) 9.9 0.0099 E15 cortex GAAGTCAAAA (3) 4.9 0.0049 E15 cortex GCCAAGATCT (5) 4.9 0.0049 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 E15 cortex TGGGAAAAAA (8) 4.9 0.0049 P1 cortex GAAGTCAAAA (3) 4.5 0.0045 P1 cortex GCCAAGATCT (5) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TGGGAAAAAA (8) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus GAAGTCAAAA (3) 19.9 0.0199 Hypothalamus GACGAGATTC (2) 5.4 0.0054 Hypothalamus TGGCCCAAAA (8) 3.6 0.0036 Hypothalamus GAAGTCAATA (2) 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 Hypothalamus TGGGAAAAAA (8) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina GAAGTCAAAA (3) 11.3 0.0113 E12.5 retina GAAGTCAATA (2) 7.5 0.0075 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina AATTTTAAAA (3) 1.9 0.0019 E12.5 retina GACGAGATTC (2) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina GAAGTCAAAA (3) 27.3 0.0273 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina GACGAGATTC (2) 5.5 0.0055 E14.5 retina TGGGAAAAAA (8) 3.6 0.0036 E14.5 retina AATTTTAAAA (3) 1.8 0.0018 E14.5 retina GCCAAGATCT (5) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina GAAGTCAAAA (3) 9.1 0.0091 E16.5 retina GAAGTCAATA (2) 5.4 0.0054 E16.5 retina GACGAGATTC (2) 5.4 0.0054 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E16.5 retina GCCAAGATCT (5) 1.8 0.0018 E16.5 retina TGGGAAAAAA (8) 1.8 0.0018 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina GAAGTCAAAA (3) 25.5 0.0255 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 E18.5 retina AATTTTAAAA (3) 5.5 0.0055 E18.5 retina GACGAGATTC (2) 3.6 0.0036 E18.5 retina TGGGAAAAAA (8) 3.6 0.0036 E18.5 retina GAAGTCAATA (2) 1.8 0.0018 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina GAAGTCAAAA (3) 5.9 0.0059 P0.5 retina GACGAGATTC (2) 5.9 0.0059 P0.5 retina TGGGAAAAAA (8) 5.9 0.0059 P0.5 retina TGGCCCAAAA (8) 3.9 0.0039 P0.5 retina AATTTTAAAA (3) 2 0.002 P0.5 retina GAAGTCAATA (2) 2 0.002 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina GAAGTCAAAA (3) 7 0.007 P2.5 retina GAAGTCAATA (2) 3.5 0.0035 P2.5 retina TGGCCCAAAA (8) 3.5 0.0035 P2.5 retina CAGAAAATAG (2) 1.8 0.0018 P2.5 retina GACGAGATTC (2) 1.8 0.0018 P2.5 retina GCCAAGATCT (5) 1.8 0.0018 P2.5 retina TGGGAAAAAA (8) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina GAAGTCAAAA (3) 11.9 0.0119 P4.5 retina TGGCCCAAAA (8) 9.9 0.0099 P4.5 retina AATTTTAAAA (3) 2 0.002 P4.5 retina TGGAAAAAAA (27) 2 0.002 P4.5 retina TGGGAAAAAA (8) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GAAGTCAAAA (3) 6.7 0.0067 P6.5 retina TGGAAAAAAA (27) 5 0.005 P6.5 retina AATTTTAAAA (3) 3.3 0.0033 P6.5 retina GCCTCCAGGG (6) 3.3 0.0033 P6.5 retina GAAGTCAATA (2) 1.7 0.0017 P6.5 retina GACGAGATTC (2) 1.7 0.0017 P6.5 retina TGGGAAAAAA (8) 1.7 0.0017 P10.5 crx- retina GACGAGATTC (2) 14.9 0.0149 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx- retina GAAGTCAAAA (3) 1.9 0.0019 P10.5 crx- retina GAAGTCAATA (2) 1.9 0.0019 P10.5 crx- retina TGGGAAAAAA (8) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina GAAGTCAAAA (3) 13.5 0.0135 P10.5 crx+ retina GAAGTCAATA (2) 5.8 0.0058 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina GACGAGATTC (2) 3.8 0.0038 P10.5 crx+ retina GCCAAGATCT (5) 1.9 0.0019 P10.5 crx+ retina TGGCCCAAAA (8) 1.9 0.0019 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal GACGAGATTC (2) 7.4 0.0074 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal GAAGTCAAAA (3) 1.9 0.0019 Adult retinal TGGGAAAAAA (8) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL GAAGTCAAAA (3) 5.7 0.0057 ONL AATTTTAAAA (3) 3.8 0.0038 ONL GACGAGATTC (2) 3.8 0.0038 ONL TGGCCCAAAA (8) 3.8 0.0038 ONL TGGGAAAAAA (8) 1.9 0.0019