Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41572
Lmbr1
limb region 1
5
5 15.8 cM
56873
Mm.41572
C79130
expressed sequence C79130
5
97236
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGTACTCGAA (
4
)
9.8
0.0098
P8 Cb GC
AAATAAAAAA (
11
)
3.3
0.0033
P8 Cb GC
ATTCCGAATT (
107
)
1.6
0.0016
P8 Cb GC
CAGCCACACA (
11
)
1.6
0.0016
P8 Cb GC
CGATTGTAGA
(
2
)
1.6
0.0016
Cb medulloblastoma
AAATAAAAAA (
11
)
4.6
0.0046
Cb medulloblastoma
CAGCCACACA (
11
)
4.6
0.0046
P8 GC+1d culture
AGTACTCGAA (
4
)
3.4
0.0034
P8 GC+1d culture
CAGCCACACA (
11
)
2.3
0.0023
P8 GC+SHH+1d culture
AAATAAAAAA (
11
)
7
0.007
P8 GC+SHH+1d culture
AGTACTCGAA (
4
)
7
0.007
P8 GC+SHH+1d culture
CACTGTATGG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCCTTAATA (
3
)
1.2
0.0012
P1 cortex
AGTACTCGAA (
4
)
13.6
0.0136
P1 cortex
AAATAAAAAA (
11
)
4.5
0.0045
Hypothalamus
AGTACTCGAA (
4
)
10.9
0.0109
Hypothalamus
AAATAAAAAA (
11
)
7.2
0.0072
Hypothalamus
CAGCCACACA (
11
)
1.8
0.0018
Hypothalamus
CGATTGTAGA
(
2
)
1.8
0.0018
E12.5 retina
AGTACTCGAA (
4
)
5.6
0.0056
E12.5 retina
AAATAAAAAA (
11
)
1.9
0.0019
E12.5 retina
TGCCTTAATA (
3
)
1.9
0.0019
E14.5 retina
AAATAAAAAA (
11
)
5.5
0.0055
E14.5 retina
TGCCTTAATA (
3
)
3.6
0.0036
E14.5 retina
CAGCCACACA (
11
)
1.8
0.0018
E16.5 retina
AAATAAAAAA (
11
)
1.8
0.0018
E16.5 retina
CACTGTATGG
(
4
)
1.8
0.0018
E16.5 retina
CAGCCACACA (
11
)
1.8
0.0018
E18.5 retina
AAATAAAAAA (
11
)
9.1
0.0091
E18.5 retina
AGTACTCGAA (
4
)
3.6
0.0036
E18.5 retina
CACTGTATGG
(
4
)
3.6
0.0036
E18.5 retina
TGCCTTAATA (
3
)
1.8
0.0018
P0.5 retina
AGTACTCGAA (
4
)
2
0.002
P0.5 retina
CAGCCACACA (
11
)
2
0.002
P2.5 retina
AAATAAAAAA (
11
)
5.3
0.0053
P2.5 retina
AGTACTCGAA (
4
)
5.3
0.0053
P2.5 retina
TGCCTTAATA (
3
)
3.5
0.0035
P2.5 retina
CACTGTATGG
(
4
)
1.8
0.0018
P4.5 retina
AGTACTCGAA (
4
)
15.9
0.0159
P4.5 retina
AAATAAAAAA (
11
)
5.9
0.0059
P4.5 retina
CACTGTATGG
(
4
)
5.9
0.0059
P4.5 retina
ATTCCGAATT (
107
)
2
0.002
P4.5 retina
CGATTGTAGA
(
2
)
2
0.002
P4.5 retina
TGCCTTAATA (
3
)
2
0.002
P6.5 retina
AAATAAAAAA (
11
)
8.3
0.0083
P6.5 retina
AGTACTCGAA (
4
)
8.3
0.0083
P6.5 retina
ATTCCGAATT (
107
)
3.3
0.0033
P6.5 retina
CACTGTATGG
(
4
)
3.3
0.0033
P6.5 retina
TGCCTTAATA (
3
)
1.7
0.0017
P10.5 crx- retina
AAATAAAAAA (
11
)
3.7
0.0037
P10.5 crx- retina
AGTACTCGAA (
4
)
3.7
0.0037
P10.5 crx- retina
CACTGTATGG
(
4
)
1.9
0.0019
P10.5 crx+ retina
AGTACTCGAA (
4
)
11.5
0.0115
P10.5 crx+ retina
AAATAAAAAA (
11
)
1.9
0.0019
P10.5 crx+ retina
CAGCCACACA (
11
)
1.9
0.0019
P10.5 crx+ retina
TGCCTTAATA (
3
)
1.9
0.0019
Adult retinal
AAATAAAAAA (
11
)
1.9
0.0019
Adult retinal
AGTACTCGAA (
4
)
1.9
0.0019
ONL
AGTACTCGAA (
4
)
7.7
0.0077
ONL
AAATAAAAAA (
11
)
3.8
0.0038
ONL
ATTCCGAATT (
107
)
3.8
0.0038
ONL
CAGCCACACA (
11
)
3.8
0.0038
ONL
CGATTGTAGA
(
2
)
1.9
0.0019
