Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.41604
9330140K16Rik
RIKEN cDNA 9330140K16 gene
1
226970
Human Homolog
ARHGEF4[Rho guanine nucleotide exchange factor (GEF) 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGTCACTCT
(
4
)
3.3
0.0033
Cb medulloblastoma
AGGGGCCAGA (
5
)
11.6
0.0116
Cb medulloblastoma
GAGTCACTCT
(
4
)
2.3
0.0023
Cb medulloblastoma
GGGCCAATAA (
6
)
2.3
0.0023
P8 GC+1d culture
GAGTCACTCT
(
4
)
3.4
0.0034
P8 GC+1d culture
AGGGGCCAGA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGTCACTCT
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
AGGGGCCAGA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGCCAATAA (
6
)
1.2
0.0012
3T3 fibroblasts
AGGGGCCAGA (
5
)
7
0.007
Hypothalamus
GAGTCACTCT
(
4
)
25.4
0.0254
Hypothalamus
AGGGGCCAGA (
5
)
9.1
0.0091
E12.5 retina
GATGACCAGG
(
2
)
7.5
0.0075
E12.5 retina
AGGGGCCAGA (
5
)
3.8
0.0038
E14.5 retina
GAGTCACTCT
(
4
)
1.8
0.0018
E14.5 retina
GATGACCAGG
(
2
)
1.8
0.0018
E14.5 retina
GGGTGGGAGG (
5
)
1.8
0.0018
E14.5 retina
TTGGATGGAT (
4
)
1.8
0.0018
E16.5 retina
GAGTCACTCT
(
4
)
1.8
0.0018
E16.5 retina
TTGGATGGAT (
4
)
1.8
0.0018
E18.5 retina
GAGTCACTCT
(
4
)
3.6
0.0036
E18.5 retina
GGGTGGGAGG (
5
)
1.8
0.0018
P0.5 retina
GATGACCAGG
(
2
)
27.5
0.0275
P0.5 retina
AGGGGCCAGA (
5
)
2
0.002
P2.5 retina
GAGTCACTCT
(
4
)
3.5
0.0035
P4.5 retina
TTGGATGGAT (
4
)
2
0.002
P6.5 retina
AGGGGCCAGA (
5
)
5
0.005
P6.5 retina
GAGTCACTCT
(
4
)
5
0.005
P6.5 retina
GGGTGGGAGG (
5
)
1.7
0.0017
P10.5 crx- retina
GAGTCACTCT
(
4
)
5.6
0.0056
P10.5 crx- retina
AGGGGCCAGA (
5
)
1.9
0.0019
P10.5 crx+ retina
AGGGGCCAGA (
5
)
1.9
0.0019
P10.5 crx+ retina
GAGTCACTCT
(
4
)
1.9
0.0019
Adult retinal
AGGGGCCAGA (
5
)
7.4
0.0074
Adult retinal
GAGTCACTCT
(
4
)
1.9
0.0019
ONL
AGGGGCCAGA (
5
)
3.8
0.0038
ONL
GAGTCACTCT
(
4
)
1.9
0.0019
ONL
GGGTGGGAGG (
5
)
1.9
0.0019
