Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41651	Atpaf2	ATP synthase mitochondrial F1 complex assembly factor 2	11		246782
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ATPAF2[ATP synthase mitochondrial F1 complex assembly factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGTTCACA (32) 14.7 0.0147 Cb medulloblastoma GTGGTTCACA (32) 11.6 0.0116 Cb medulloblastoma GGAGGGCAGA (9) 2.3 0.0023 Cb medulloblastoma GTGCTCACAA (5) 2.3 0.0023 P8 GC+1d culture GTGGTTCACA (32) 18.3 0.0183 P8 GC+SHH+1d culture GTGGTTCACA (32) 31.6 0.0316 P8 GC+SHH+1d culture GTGCTCACAA (5) 3.5 0.0035 P8 GC+SHH+1d culture GGAGGGCAGA (9) 1.2 0.0012 3T3 fibroblasts GTGGTTCACA (32) 17.5 0.0175 E15 cortex GTGGTTCACA (32) 4.9 0.0049 P1 cortex GTGGTTCACA (32) 27.3 0.0273 P1 cortex AGGTTCCTAG 4.5 0.0045 Hypothalamus GTGGTTCACA (32) 12.7 0.0127 Hypothalamus AGGTTCCTAG 1.8 0.0018 Hypothalamus GTGCTCACAA (5) 1.8 0.0018 E12.5 retina GTGGTTCACA (32) 28.2 0.0282 E14.5 retina GTGGTTCACA (32) 51 0.051 E14.5 retina GGAGGGCAGA (9) 3.6 0.0036 E14.5 retina GTGCTCACAA (5) 3.6 0.0036 E16.5 retina GTGGTTCACA (32) 39.8 0.0398 E16.5 retina GTGCTCACAA (5) 3.6 0.0036 E16.5 retina AGGTTCCTAG 1.8 0.0018 E18.5 retina GTGGTTCACA (32) 40 0.04 P0.5 retina GTGGTTCACA (32) 35.3 0.0353 P0.5 retina AGGTTCCTAG 2 0.002 P0.5 retina GTGCTCACAA (5) 2 0.002 P2.5 retina GTGGTTCACA (32) 12.3 0.0123 P4.5 retina GTGGTTCACA (32) 33.7 0.0337 P6.5 retina GTGGTTCACA (32) 25 0.025 P10.5 crx- retina GTGGTTCACA (32) 20.4 0.0204 P10.5 crx- retina TTGCTGACTT (4) 1.9 0.0019 P10.5 crx+ retina GTGGTTCACA (32) 32.7 0.0327 P10.5 crx+ retina GGAGGGCAGA (9) 1.9 0.0019 P10.5 crx+ retina GTGCTCACAA (5) 1.9 0.0019 Adult retinal GTGGTTCACA (32) 33.3 0.0333 Adult retinal GTGCTCACAA (5) 3.7 0.0037 Adult retinal TTGCTGACTT (4) 1.9 0.0019 ONL GTGGTTCACA (32) 32.6 0.0326 ONL GTGCTCACAA (5) 3.8 0.0038 ONL AGGTTCCTAG 1.9 0.0019