Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41665	Grina	glutamate receptor, ionotropic, N-methyl D-asparate-associated protein 1 (glutamate binding)	15		66168
Gene Ontology	integral to membrane | receptor activity
Human Homolog	GRINA[glutamate receptor, ionotropic, N-methyl D-asparate-associated protein 1 (glutamate binding)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTCAAGGGA (2) 9.8 0.0098 P8 Cb GC GCTCCAGCCC (3) 1.6 0.0016 P8 Cb GC TTCAGGGAGA (3) 1.6 0.0016 Cb medulloblastoma TTTCAAGGGA (2) 41.6 0.0416 Cb medulloblastoma ACATCCTCTC 2.3 0.0023 Cb medulloblastoma GCCCCCTTTA 2.3 0.0023 Cb medulloblastoma GCTCCAGCCC (3) 2.3 0.0023 P8 GC+1d culture TTTCAAGGGA (2) 34.2 0.0342 P8 GC+1d culture GCCCCCTTTA 1.1 0.0011 P8 GC+1d culture GGAACTACCA 1.1 0.0011 P8 GC+SHH+1d culture TTTCAAGGGA (2) 23.4 0.0234 P8 GC+SHH+1d culture TTTCAAAGGG 1.2 0.0012 3T3 fibroblasts TTTCAAGGGA (2) 14 0.014 E15 cortex GCTGCTCCTG (2) 4.9 0.0049 E15 cortex TTCAGGGAGA (3) 4.9 0.0049 E15 cortex TTTCAAGGGA (2) 4.9 0.0049 P1 cortex TTTCAAGGGA (2) 22.7 0.0227 Hypothalamus TTTCAAGGGA (2) 39.8 0.0398 Hypothalamus AGCCCTGTCT (3) 1.8 0.0018 Hypothalamus GCCCCCTTTA 1.8 0.0018 Hypothalamus GCTCCAGCCC (3) 1.8 0.0018 E12.5 retina TTTCAAGGGA (2) 20.7 0.0207 E12.5 retina TTCAGGGAGA (3) 1.9 0.0019 E14.5 retina TTTCAAGGGA (2) 31 0.031 E14.5 retina ACATCCTCTC 1.8 0.0018 E14.5 retina GACCAAGGAG (5) 1.8 0.0018 E14.5 retina GCTCCAGCCC (3) 1.8 0.0018 E16.5 retina TTTCAAGGGA (2) 43.5 0.0435 E16.5 retina GCTCCAGCCC (3) 1.8 0.0018 E18.5 retina TTTCAAGGGA (2) 12.7 0.0127 E18.5 retina GACCAAGGAG (5) 1.8 0.0018 P0.5 retina TTTCAAGGGA (2) 17.7 0.0177 P0.5 retina AGCCCTGTCT (3) 2 0.002 P2.5 retina TTTCAAGGGA (2) 66.9 0.0669 P2.5 retina GACCAAGGAG (5) 3.5 0.0035 P2.5 retina TTCAGGGAGA (3) 1.8 0.0018 P4.5 retina TTTCAAGGGA (2) 75.3 0.0753 P4.5 retina GACCAAGGAG (5) 4 0.004 P4.5 retina TTTCAAAGGG 2 0.002 P6.5 retina TTTCAAGGGA (2) 125.1 0.1251 P6.5 retina GGAACTACCA 3.3 0.0033 P6.5 retina GACCAAGGAG (5) 1.7 0.0017 P6.5 retina GCTGCTCCTG (2) 1.7 0.0017 P6.5 retina TTCAGGGAGA (3) 1.7 0.0017 P10.5 crx- retina TTTCAAGGGA (2) 98.5 0.0985 P10.5 crx- retina ACATCCTCTC 3.7 0.0037 P10.5 crx- retina TTCAGGGAGA (3) 3.7 0.0037 P10.5 crx- retina GCCCCCTTTA 1.9 0.0019 P10.5 crx+ retina TTTCAAGGGA (2) 73.1 0.0731 P10.5 crx+ retina AGCCCTGTCT (3) 1.9 0.0019 Adult retinal TTTCAAGGGA (2) 79.6 0.0796 Adult retinal ACATCCTCTC 3.7 0.0037 Adult retinal GCTCCAGCCC (3) 1.9 0.0019 Adult retinal TTTCAAAGGG 1.9 0.0019 ONL TTTCAAGGGA (2) 78.5 0.0785 ONL GCTCCAGCCC (3) 1.9 0.0019 ONL GCTGCTCCTG (2) 1.9 0.0019 ONL GGAACTACCA 1.9 0.0019