Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4168	Slc12a2	solute carrier family 12, member 2	18	18 32.0 cM	20496
Gene Ontology	amino acid transport | amino acid-polyamine transporter activity | basolateral plasma membrane | carrier activity | cation:chloride symporter activity | chloride transport | integral to membrane | integral to plasma membrane | ion transport | membrane | potassium ion transport | sodium ion transport | symporter activity | transport | transporter activity
Human Homolog	SLC12A2[solute carrier family 12 (sodium/potassium/chloride transporters), member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGGAATTT (5) 37.5 0.0375 P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC ATGCTTTTGA (2) 3.3 0.0033 P8 Cb GC TATTTTTTTA (7) 3.3 0.0033 P8 Cb GC AACTTCAGTG (3) 1.6 0.0016 P8 Cb GC ATGCTTTATA (4) 1.6 0.0016 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC GTTTTTTTTT (16) 1.6 0.0016 P8 Cb GC TGTATGTGTG (9) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CCTGGAATTT (5) 6.9 0.0069 Cb medulloblastoma GTTTTTTTTT (16) 4.6 0.0046 Cb medulloblastoma ATGCTTTATA (4) 2.3 0.0023 Cb medulloblastoma GTCCTTGGAG (2) 2.3 0.0023 P8 GC+1d culture CCTGGAATTT (5) 30.8 0.0308 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TTACACGTGT 2.3 0.0023 P8 GC+1d culture ATGCTTTTGA (2) 1.1 0.0011 P8 GC+1d culture GTTTTTTTTT (16) 1.1 0.0011 P8 GC+1d culture TATTTTTTTA (7) 1.1 0.0011 P8 GC+1d culture TGCACACGTG (6) 1.1 0.0011 P8 GC+1d culture TGCTGATAGA (4) 1.1 0.0011 P8 GC+1d culture TGTATGTGTG (9) 1.1 0.0011 P8 GC+SHH+1d culture CCTGGAATTT (5) 38.6 0.0386 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture TATTTTTTTA (7) 3.5 0.0035 P8 GC+SHH+1d culture GTTTTTTTTT (16) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTATGTG 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts CCTGGAATTT (5) 3.5 0.0035 E15 cortex CCTGGAATTT (5) 54.4 0.0544 E15 cortex AAGAGAGCAG (7) 4.9 0.0049 E15 cortex GTCCTTGGAG (2) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex CCTGGAATTT (5) 9.1 0.0091 P1 cortex TGCACACGTG (6) 4.5 0.0045 P1 cortex TGTATGTGTG (9) 4.5 0.0045 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus CCTGGAATTT (5) 3.6 0.0036 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina CCTGGAATTT (5) 24.4 0.0244 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina CCTGGAATTT (5) 40.1 0.0401 E14.5 retina TATTTTTTTA (7) 7.3 0.0073 E14.5 retina GTCCTTGGAG (2) 1.8 0.0018 E14.5 retina GTTTTTTTTT (16) 1.8 0.0018 E14.5 retina TCTGTATGTG 1.8 0.0018 E14.5 retina TGTATGTGTG (9) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina CCTGGAATTT (5) 25.4 0.0254 E16.5 retina AAGAGAGCAG (7) 1.8 0.0018 E16.5 retina ATGCTTTATA (4) 1.8 0.0018 E16.5 retina TCTGTATGTG 1.8 0.0018 E16.5 retina TGCACACGTG (6) 1.8 0.0018 E16.5 retina TGTATGTGTG (9) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina CCTGGAATTT (5) 43.7 0.0437 E18.5 retina AACTTCAGTG (3) 1.8 0.0018 E18.5 retina ATGCTTTATA (4) 1.8 0.0018 E18.5 retina GTTTTTTTTT (16) 1.8 0.0018 E18.5 retina TGCTGATAGA (4) 1.8 0.0018 E18.5 retina TGTATGTGTG (9) 1.8 0.0018 P0.5 retina CCTGGAATTT (5) 27.5 0.0275 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina TTACACGTGT 3.9 0.0039 P0.5 retina GTTTTTTTTT (16) 2 0.002 P0.5 retina TATTTTTTTA (7) 2 0.002 P2.5 retina CCTGGAATTT (5) 45.8 0.0458 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina AAGAGAGCAG (7) 1.8 0.0018 P2.5 retina TATTTTTTTA (7) 1.8 0.0018 P2.5 retina TCTGTATGTG 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina CCTGGAATTT (5) 43.6 0.0436 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina GTTTTTTTTT (16) 2 0.002 P4.5 retina TATTTTTTTA (7) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina CCTGGAATTT (5) 20 0.02 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina TGCTGATAGA (4) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina CCTGGAATTT (5) 13 0.013 P10.5 crx- retina AACTTCAGTG (3) 1.9 0.0019 P10.5 crx- retina ATGCTTTATA (4) 1.9 0.0019 P10.5 crx- retina GTTTTTTTTT (16) 1.9 0.0019 P10.5 crx- retina TGCTGATAGA (4) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina CCTGGAATTT (5) 13.5 0.0135 P10.5 crx+ retina TGCTGATAGA (4) 5.8 0.0058 P10.5 crx+ retina TGCACACGTG (6) 3.8 0.0038 P10.5 crx+ retina AACTTCAGTG (3) 1.9 0.0019 P10.5 crx+ retina ATGCTTTATA (4) 1.9 0.0019 P10.5 crx+ retina GTCCTTGGAG (2) 1.9 0.0019 P10.5 crx+ retina GTTTTTTTTT (16) 1.9 0.0019 P10.5 crx+ retina TCTGTATGTG 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal CCTGGAATTT (5) 7.4 0.0074 Adult retinal AACTTCAGTG (3) 3.7 0.0037 Adult retinal TTACACGTGT 3.7 0.0037 Adult retinal TGCACACGTG (6) 1.9 0.0019 Adult retinal TGTATGTGTG (9) 1.9 0.0019 Adult retinal TTTTTTTTAA (5) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL CCTGGAATTT (5) 9.6 0.0096 ONL ATTCCGAATT (107) 3.8 0.0038 ONL ATGCTTTATA (4) 1.9 0.0019 ONL TGCACACGTG (6) 1.9 0.0019 ONL TGTATGTGTG (9) 1.9 0.0019