Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4172	Slbp	stem-loop binding protein	5		20492
Mm.4172	2410015J15Rik	RIKEN cDNA 2410015J15 gene	5		69753
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATCCAGTTG (2) 3.3 0.0033 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GTAAATTAAC (2) 6.9 0.0069 Cb medulloblastoma AGTTAACTGC (3) 4.6 0.0046 Cb medulloblastoma TATCCAGTTG (2) 4.6 0.0046 Cb medulloblastoma AAGTTACCTG (6) 2.3 0.0023 P8 GC+1d culture TATCCAGTTG (2) 3.4 0.0034 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture GAAATGCCCT (5) 1.1 0.0011 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture TATCCAGTTG (2) 8.2 0.0082 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTTTCAAGGG (3) 1.2 0.0012 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex TATCCAGTTG (2) 9.9 0.0099 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 P1 cortex TATCCAGTTG (2) 4.5 0.0045 Hypothalamus TATCCAGTTG (2) 9.1 0.0091 Hypothalamus AGTTAACTGC (3) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 Hypothalamus GTAAATTAAC (2) 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 E12.5 retina TATCCAGTTG (2) 11.3 0.0113 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina TGCTAAAATA (3) 1.9 0.0019 E14.5 retina TATCCAGTTG (2) 14.6 0.0146 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina AAGTTACCTG (6) 1.8 0.0018 E14.5 retina AGTTAACTGC (3) 1.8 0.0018 E14.5 retina TGCTAAAATA (3) 1.8 0.0018 E16.5 retina TATCCAGTTG (2) 12.7 0.0127 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E16.5 retina AAGTTACCTG (6) 1.8 0.0018 E16.5 retina TGCTAAAATA (3) 1.8 0.0018 E18.5 retina TATCCAGTTG (2) 34.6 0.0346 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 E18.5 retina GTAAATTAAC (2) 5.5 0.0055 E18.5 retina AGTTAACTGC (3) 1.8 0.0018 E18.5 retina TGCTAAAATA (3) 1.8 0.0018 E18.5 retina TTTTCAAGGG (3) 1.8 0.0018 P0.5 retina TATCCAGTTG (2) 19.6 0.0196 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina GAAATGCCCT (5) 3.9 0.0039 P0.5 retina TGCTAAAATA (3) 2 0.002 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina TATCCAGTTG (2) 7 0.007 P2.5 retina GTAAATTAAC (2) 5.3 0.0053 P2.5 retina AGTTAACTGC (3) 3.5 0.0035 P2.5 retina TGCTAAAATA (3) 1.8 0.0018 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina AGTTAACTGC (3) 4 0.004 P4.5 retina TATCCAGTTG (2) 4 0.004 P4.5 retina TGGAAAAAAA (27) 2 0.002 P6.5 retina TATCCAGTTG (2) 5 0.005 P6.5 retina TGGAAAAAAA (27) 5 0.005 P6.5 retina GAAATGCCCT (5) 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina GTAAATTAAC (2) 1.7 0.0017 P6.5 retina TGCTAAAATA (3) 1.7 0.0017 P10.5 crx- retina TGCTAAAATA (3) 3.7 0.0037 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx- retina TATCCAGTTG (2) 1.9 0.0019 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina TATCCAGTTG (2) 3.8 0.0038 P10.5 crx+ retina TGCTAAAATA (3) 1.9 0.0019 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal AGTTAACTGC (3) 1.9 0.0019 Adult retinal TGCTAAAATA (3) 1.9 0.0019 ONL TTTTCAAGGG (3) 3.8 0.0038 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TATCCAGTTG (2) 1.9 0.0019