Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41758	D16Ium23e	DNA segment, Chr 16, Indiana University Medical 23, expressed	16	16 45.9 cM	28184
Mm.41758	Jam2	junction adhesion molecule 2	16		67374
Gene Ontology	extracellular space | integral to membrane
Human Homolog	JAM2[junctional adhesion molecule 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTATTAAAAT (6) 11.4 0.0114 P8 Cb GC CAGAAATCAT (4) 1.6 0.0016 Cb medulloblastoma TTATTAAAAT (6) 9.2 0.0092 Cb medulloblastoma AAGACCTGTC (6) 2.3 0.0023 Cb medulloblastoma AAGGGAGCTG (9) 2.3 0.0023 Cb medulloblastoma TTGTACAGGT (2) 2.3 0.0023 P8 GC+1d culture TTATTAAAAT (6) 12.6 0.0126 P8 GC+1d culture CAGAAATCAT (4) 2.3 0.0023 P8 GC+1d culture TTGTACAGGT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTATTAAAAT (6) 26.9 0.0269 P8 GC+SHH+1d culture CTATGCTCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGTACAGGT (2) 1.2 0.0012 3T3 fibroblasts CTATGCTCAG (2) 3.5 0.0035 3T3 fibroblasts GCCAAGGCCT (8) 3.5 0.0035 E15 cortex GCCAAGGCCT (8) 4.9 0.0049 E15 cortex TGACAACTGG (4) 4.9 0.0049 P1 cortex TTATTAAAAT (6) 13.6 0.0136 P1 cortex GCCAAGGCCT (8) 9.1 0.0091 Hypothalamus TTATTAAAAT (6) 10.9 0.0109 Hypothalamus AAGACCTGTC (6) 1.8 0.0018 E12.5 retina ACTATTTTTA (4) 15 0.015 E12.5 retina TTATTAAAAT (6) 9.4 0.0094 E12.5 retina TTGTACAGGT (2) 1.9 0.0019 E14.5 retina TTATTAAAAT (6) 14.6 0.0146 E14.5 retina ACTATTTTTA (4) 5.5 0.0055 E14.5 retina TGACAACTGG (4) 1.8 0.0018 E16.5 retina TTATTAAAAT (6) 12.7 0.0127 E16.5 retina TTGTACAGGT (2) 3.6 0.0036 E16.5 retina ACTATTTTTA (4) 1.8 0.0018 E18.5 retina TTATTAAAAT (6) 29.1 0.0291 E18.5 retina ACTATTTTTA (4) 3.6 0.0036 E18.5 retina AAGGCATCTC (2) 1.8 0.0018 E18.5 retina CTATGCTCAG (2) 1.8 0.0018 E18.5 retina TGCCAAGGCC (5) 1.8 0.0018 E18.5 retina TTGTACAGGT (2) 1.8 0.0018 P0.5 retina TTATTAAAAT (6) 5.9 0.0059 P0.5 retina ACTATTTTTA (4) 2 0.002 P0.5 retina GCCAAGGCCT (8) 2 0.002 P0.5 retina TTGTACAGGT (2) 2 0.002 P2.5 retina TTATTAAAAT (6) 10.6 0.0106 P2.5 retina TTGTACAGGT (2) 7 0.007 P2.5 retina GCCAAGGCCT (8) 1.8 0.0018 P2.5 retina TGCCAAGGCC (5) 1.8 0.0018 P4.5 retina TTATTAAAAT (6) 11.9 0.0119 P4.5 retina TTGTACAGGT (2) 9.9 0.0099 P4.5 retina AAGGCATCTC (2) 2 0.002 P4.5 retina GCCAAGGCCT (8) 2 0.002 P6.5 retina TTATTAAAAT (6) 23.3 0.0233 P6.5 retina TTGTACAGGT (2) 6.7 0.0067 P6.5 retina TGACAACTGG (4) 1.7 0.0017 P10.5 crx- retina TTATTAAAAT (6) 9.3 0.0093 P10.5 crx- retina TTGTACAGGT (2) 5.6 0.0056 P10.5 crx- retina AAGGCATCTC (2) 3.7 0.0037 P10.5 crx+ retina TTATTAAAAT (6) 9.6 0.0096 P10.5 crx+ retina AAGGCATCTC (2) 3.8 0.0038 P10.5 crx+ retina TTGTACAGGT (2) 3.8 0.0038 P10.5 crx+ retina AAGGGAGCTG (9) 1.9 0.0019 P10.5 crx+ retina TGCCAAGGCC (5) 1.9 0.0019 Adult retinal TTGTACAGGT (2) 9.3 0.0093 Adult retinal TTATTAAAAT (6) 5.6 0.0056 Adult retinal AAGGCATCTC (2) 1.9 0.0019 Adult retinal AAGGGAGCTG (9) 1.9 0.0019 Adult retinal GCCAAGGCCT (8) 1.9 0.0019 ONL TTATTAAAAT (6) 7.7 0.0077 ONL AAGGCATCTC (2) 5.7 0.0057 ONL AAGACCTGTC (6) 1.9 0.0019 ONL TTGTACAGGT (2) 1.9 0.0019